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This orthogroup contains 289 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 289 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14027 | RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 | 264 / 289 | 91.4% | 100.0% of 264 | ≥80% support |
| GO | GO:0000993 Molecular Function | RNA polymerase II complex binding | 264 / 289 | 91.4% | 100.0% of 264 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 264 / 289 | 91.4% | 100.0% of 264 | ≥80% support |
| GO | GO:0006368 Biological Process | transcription elongation by RNA polymerase II | 264 / 289 | 91.4% | 100.0% of 264 | ≥80% support |
| GO | GO:0016593 Cellular Component | Cdc73/Paf1 complex | 264 / 289 | 91.4% | 100.0% of 264 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 235 / 289 | 81.3% | 89.0% of 264 | ≥80% support |
| Pfam | PF13181 | TPR_8 — Tetratricopeptide repeat | 186 / 289 | 64.4% | 86.1% of 216 | ≥50% support |
| Pfam | PF14559 | TPR_19 — Tetratricopeptide repeat | 180 / 289 | 62.3% | 83.3% of 216 | ≥50% support |
| Pfam | PF13374 | TPR_10 — Tetratricopeptide repeat | 163 / 289 | 56.4% | 75.5% of 216 | ≥50% support |
| KEGG | K15176 | CTR9 — Transcription machinery | 173 / 289 | 59.9% | 97.7% of 177 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g10126.t1 | XP_029209643.2 | RNA polymerase-associated protein CTR9 homolog [Acropora millepora] | Q62018 RNA polymerase-associated protein CTR9 homolog OS=Mus muscul | JBrowse |
| Montipora capitata | g10128.t1 | XP_029209643.2 | RNA polymerase-associated protein CTR9 homolog [Acropora millepora] | Q6DEU9 RNA polymerase-associated protein CTR9 homolog OS=Xenopus tr | JBrowse |
| Montipora capitata | g10131.t1 | CAH3196270.1 | unnamed protein product, partial [Porites evermanni] | Q4QR29 RNA polymerase-associated protein CTR9 homolog OS=Xenopus la | JBrowse |
