← Back to the gene family browser
This orthogroup contains 272 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 272 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 230 / 272 | 84.6% | 95.8% of 240 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 230 / 272 | 84.6% | 96.6% of 238 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 230 / 272 | 84.6% | 96.6% of 238 | ≥80% support |
| PANTHER | PTHR24031 | RNA HELICASE | 166 / 272 | 61.0% | 69.2% of 240 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 190 / 272 | 69.9% | 79.2% of 240 | ≥50% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 213 / 272 | 78.3% | 89.5% of 238 | ≥50% support |
| GO | GO:0005730 Cellular Component | nucleolus | 166 / 272 | 61.0% | 69.8% of 238 | ≥50% support |
| KEGG | K14805 | DDX24, MAK5 — Ribosome biogenesis | 165 / 272 | 60.7% | 98.8% of 167 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g21692.t1 | CAH3153825.1 | unnamed protein product [Pocillopora meandrina] | Q54TD7 ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum | JBrowse |
