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This orthogroup contains 241 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 241 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23205 | SPLICING FACTOR 3A SUBUNIT 2 | 216 / 241 | 89.6% | 100.0% of 216 | ≥80% support |
| GO | GO:0000245 Biological Process | spliceosomal complex assembly | 216 / 241 | 89.6% | 100.0% of 216 | ≥80% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 216 / 241 | 89.6% | 100.0% of 216 | ≥80% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 216 / 241 | 89.6% | 100.0% of 216 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 216 / 241 | 89.6% | 100.0% of 216 | ≥80% support |
| Pfam | PF16835 | SF3A2 — Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 192 / 241 | 79.7% | 91.9% of 209 | ≥50% support |
| Pfam | PF12874 | zf-met — Zinc-finger of C2H2 type | 173 / 241 | 71.8% | 82.8% of 209 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 172 / 241 | 71.4% | 79.6% of 216 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 172 / 241 | 71.4% | 79.6% of 216 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 172 / 241 | 71.4% | 79.6% of 216 | ≥50% support |
| KEGG | K12826 | SF3A2, SAP62 — Spliceosome | 177 / 241 | 73.4% | 99.4% of 178 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g27323.t1 | CAH3118732.1 | unnamed protein product [Pocillopora meandrina] | Q15428 Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A | JBrowse |
| Montipora capitata | g27325.t1 | CAH3150472.1 | unnamed protein product [Porites evermanni] | Q15428 Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A | JBrowse |
