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This orthogroup contains 212 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 212 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12636 | NEP1/MRA1 | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| Pfam | PF03587 | EMG1 | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0032040 Cellular Component | small-subunit processome | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0070037 Molecular Function | rRNA (pseudouridine) methyltransferase activity | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0070475 Biological Process | rRNA base methylation | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| KEGG | K14568 | EMG1, NEP1 — Ribosome biogenesis | 163 / 212 | 76.9% | 100.0% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g9008.t1 | CAH3178786.1 | unnamed protein product [Porites evermanni] | O35130 Ribosomal RNA small subunit methyltransferase NEP1 OS=Mus mu | JBrowse |
