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Support counts the member genes carrying the term. % of genes is that count over all 160 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | 153 / 160 | 95.6% | 100.0% of 153 | ≥80% support |
| Pfam | PF02176 | zf-TRAF — TRAF-type zinc finger | 152 / 160 | 95.0% | 99.4% of 153 | ≥80% support |
| Pfam | PF21355 | TRAF-mep_MATH — TRAF/meprin, MATH domain | 144 / 160 | 90.0% | 94.1% of 153 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 152 / 160 | 95.0% | 99.4% of 153 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 147 / 160 | 91.9% | 96.1% of 153 | ≥80% support |
| GO | GO:0007165 Biological Process | signal transduction | 143 / 160 | 89.4% | 93.5% of 153 | ≥80% support |
| GO | GO:0042981 Biological Process | regulation of apoptotic process | 143 / 160 | 89.4% | 93.5% of 153 | ≥80% support |
| GO | GO:0033209 Biological Process | tumor necrosis factor-mediated signaling pathway | 140 / 160 | 87.5% | 91.5% of 153 | ≥80% support |
| GO | GO:0070534 Biological Process | protein K63-linked ubiquitination | 140 / 160 | 87.5% | 91.5% of 153 | ≥80% support |
| KEGG | K09848 | TRAF4 — Small cell lung cancer | 142 / 160 | 88.8% | 100.0% of 142 | ≥80% support |
| Pfam | PF00097 | zf-C3HC4 — Zinc finger, C3HC4 type (RING finger) | 91 / 160 | 56.9% | 59.5% of 153 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 91 / 160 | 56.9% | 59.5% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g19185.t1 | XP_015758732.1 | PREDICTED: TNF receptor-associated factor 4-like [Acropora digitifera] | Q9BUZ4 TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN= | JBrowse |
