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This orthogroup contains 286 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 286 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR42918 | LYSYL-TRNA SYNTHETASE | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| Pfam | PF00152 | tRNA-synt_2 — tRNA synthetases class II (D, K and N) | 245 / 286 | 85.7% | 97.6% of 251 | ≥80% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| GO | GO:0004824 Molecular Function | lysine-tRNA ligase activity | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| GO | GO:0006430 Biological Process | lysyl-tRNA aminoacylation | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 249 / 286 | 87.1% | 98.0% of 254 | ≥80% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 245 / 286 | 85.7% | 96.5% of 254 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 245 / 286 | 85.7% | 96.5% of 254 | ≥80% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 245 / 286 | 85.7% | 96.5% of 254 | ≥80% support |
| Pfam | PF01336 | tRNA_anti-codon — OB-fold nucleic acid binding domain | 208 / 286 | 72.7% | 82.9% of 251 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 224 / 286 | 78.3% | 88.2% of 254 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 208 / 286 | 72.7% | 81.9% of 254 | ≥50% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 200 / 286 | 69.9% | 78.7% of 254 | ≥50% support |
| GO | GO:0017101 Cellular Component | aminoacyl-tRNA synthetase multienzyme complex | 200 / 286 | 69.9% | 78.7% of 254 | ≥50% support |
| KEGG | K04567 | KARS, lysS — Transfer RNA biogenesis | 182 / 286 | 63.6% | 97.3% of 187 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capricornis | XP_068725668.1 | XP_015756409.1 | PREDICTED: lysine--tRNA ligase-like isoform X1 [Acropora digitifera] | Q99MN1 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 S | JBrowse |
