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This orthogroup contains 259 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 259 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10350 | NUCLEAR PORE COMPLEX PROTEIN NUP155 | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0000972 Biological Process | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0006405 Biological Process | RNA export from nucleus | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0006913 Biological Process | nucleocytoplasmic transport | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0036228 Biological Process | protein localization to nuclear inner membrane | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| GO | GO:0044611 Cellular Component | nuclear pore inner ring | 232 / 259 | 89.6% | 100.0% of 232 | ≥80% support |
| Pfam | PF03177 | Nucleoporin_C — Non-repetitive/WGA-negative nucleoporin C-terminal | 182 / 259 | 70.3% | 83.9% of 217 | ≥50% support |
| Pfam | PF08801 | Nucleoporin_N — Nup133 N terminal like | 182 / 259 | 70.3% | 83.9% of 217 | ≥50% support |
| KEGG | K14312 | NUP155, NUP170, NUP157 — Messenger RNA biogenesis | 152 / 259 | 58.7% | 95.6% of 159 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capricornis | XP_068726637.1 | XP_044164527.1 | nuclear pore complex protein Nup155-like [Acropora millepora] | Q99P88 Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 | JBrowse |
| Montipora capricornis | XP_068726638.1 | XP_044164527.1 | nuclear pore complex protein Nup155-like [Acropora millepora] | Q99P88 Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 | JBrowse |
