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Support counts the member genes carrying the term. % of genes is that count over all 743 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 601 / 743 | 80.9% | 98.9% of 608 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 601 / 743 | 80.9% | 98.9% of 608 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 600 / 743 | 80.8% | 98.7% of 608 | ≥80% support |
| PANTHER | PTHR23042 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS | 585 / 743 | 78.7% | 96.9% of 604 | ≥50% support |
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 523 / 743 | 70.4% | 87.9% of 595 | ≥50% support |
| Pfam | PF14598 | PAS_11 — PAS domain | 492 / 743 | 66.2% | 82.7% of 595 | ≥50% support |
| Pfam | PF00989 | PAS | 471 / 743 | 63.4% | 79.2% of 595 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 590 / 743 | 79.4% | 97.0% of 608 | ≥50% support |
| GO | GO:0034751 Cellular Component | aryl hydrocarbon receptor complex | 585 / 743 | 78.7% | 96.2% of 608 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 563 / 743 | 75.8% | 92.6% of 608 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 549 / 743 | 73.9% | 90.3% of 608 | ≥50% support |
| GO | GO:0005667 Cellular Component | transcription regulator complex | 549 / 743 | 73.9% | 90.3% of 608 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 549 / 743 | 73.9% | 90.3% of 608 | ≥50% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 534 / 743 | 71.9% | 87.8% of 608 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Muricea muricata | BRAKERXEIP00000004738.1 | XP_028410576.1 | protein cycle-like isoform X2 [Dendronephthya gigantea] | Q9WTL8 Basic helix-loop-helix ARNT-like protein 1 OS=Mus musculus O | JBrowse |
| Muricea muricata | BRAKERXEIP00000025943.1 | XP_028399043.1 | aryl hydrocarbon receptor nuclear translocator-like isoform X1 [Dendronephthya gigantea] | O15945 Aryl hydrocarbon receptor nuclear translocator homolog OS=Dr | JBrowse |
| Muricea muricata | BRAKERXEIP00000039982.1 | XP_028397626.1 | neuronal PAS domain-containing protein 2-like [Dendronephthya gigantea] | O08785 Circadian locomoter output cycles protein kaput OS=Mus muscu | JBrowse |
