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This orthogroup contains 224 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23236 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 189 / 224 | 84.4% | 99.0% of 191 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 190 / 224 | 84.8% | 99.5% of 191 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 190 / 224 | 84.8% | 99.5% of 191 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 190 / 224 | 84.8% | 99.5% of 191 | ≥80% support |
| GO | GO:0008143 Molecular Function | poly(A) binding | 188 / 224 | 83.9% | 98.4% of 191 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 185 / 224 | 82.6% | 96.9% of 191 | ≥80% support |
| KEGG | K14396 | PABPN1, PABP2 — Messenger RNA biogenesis | 185 / 224 | 82.6% | 98.9% of 187 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Muricea muricata | BRAKERXEIP00000050832.1 | CAB3996710.1 | polyadenylate-binding 2 [Paramuricea clavata] | Q8CCS6 Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN= | JBrowse |
