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This orthogroup contains 219 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 219 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11477 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN | 188 / 219 | 85.8% | 97.4% of 193 | ≥80% support |
| Pfam | PF07500 | TFIIS_M — Transcription factor S-II (TFIIS), central domain | 184 / 219 | 84.0% | 94.4% of 195 | ≥80% support |
| Pfam | PF01096 | TFIIS_C — Transcription factor S-II (TFIIS) | 181 / 219 | 82.7% | 92.8% of 195 | ≥80% support |
| Pfam | PF08711 | Med26 — TFIIS helical bundle-like domain | 180 / 219 | 82.2% | 92.3% of 195 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 193 / 219 | 88.1% | 99.0% of 195 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 190 / 219 | 86.8% | 97.4% of 195 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 181 / 219 | 82.7% | 92.8% of 195 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 181 / 219 | 82.7% | 92.8% of 195 | ≥80% support |
| GO | GO:0006368 Biological Process | transcription elongation by RNA polymerase II | 153 / 219 | 69.9% | 78.5% of 195 | ≥50% support |
| KEGG | K03145 | TFIIS — Transcription machinery | 166 / 219 | 75.8% | 100.0% of 166 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Muricea muricata | BRAKERXEIP00000028512.1 | CAB4038252.1 | transcription elongation factor A 1-like [Paramuricea clavata] | Q29RL9 Transcription elongation factor A protein 1 OS=Bos taurus OX | JBrowse |
