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Support counts the member genes carrying the term. % of genes is that count over all 11 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45803 | SOX100B | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| GO | GO:0005634 Cellular Component | nucleus | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 11 / 11 | 100.0% | 100.0% of 11 | 100% consensus |
| KEGG | K09270 | SOX7S — Transcription factors | 8 / 11 | 72.7% | 100.0% of 8 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Muricea muricata | BRAKERXEIP00000053516.1 | CAB4002394.1 | Hypothetical predicted protein [Paramuricea clavata] | P48434 Transcription factor SOX-9 OS=Gallus gallus OX=9031 GN=SOX9 | JBrowse |
