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Support counts the member genes carrying the term. % of genes is that count over all 8 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19376 | DNA-DIRECTED RNA POLYMERASE | 8 / 8 | 100.0% | 100.0% of 8 | 100% consensus |
| GO | GO:0003677 Molecular Function | DNA binding | 8 / 8 | 100.0% | 100.0% of 8 | 100% consensus |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 8 / 8 | 100.0% | 100.0% of 8 | 100% consensus |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 8 / 8 | 100.0% | 100.0% of 8 | 100% consensus |
| Pfam | PF00623 | RNA_pol_Rpb1_2 — RNA polymerase Rpb1, domain 2 | 7 / 8 | 87.5% | 87.5% of 8 | ≥80% support |
| Pfam | PF04997 | RNA_pol_Rpb1_1 — RNA polymerase Rpb1, domain 1 | 7 / 8 | 87.5% | 87.5% of 8 | ≥80% support |
| Pfam | PF04983 | RNA_pol_Rpb1_3 — RNA polymerase Rpb1, domain 3 | 6 / 8 | 75.0% | 75.0% of 8 | ≥50% support |
| Pfam | PF05000 | RNA_pol_Rpb1_4 — RNA polymerase Rpb1, domain 4 | 5 / 8 | 62.5% | 62.5% of 8 | ≥50% support |
| Pfam | PF04998 | RNA_pol_Rpb1_5 — RNA polymerase Rpb1, domain 5 | 4 / 8 | 50.0% | 50.0% of 8 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Muricea muricata | BRAKERXEIP00000007420.1 | GHV49454.1 | hypothetical protein AGMMS49579_01150 [Spirochaetia bacterium] | O55766 Probable DNA-directed RNA polymerase II subunit RPB1 homolog | JBrowse |
| Muricea muricata | BRAKERXEIP00000007781.1 | QXT57846.1 | DNA-dependent RNA polymerase II largest subunit [Rhinella marina erythrocytic-like virus] | Q196X0 Probable DNA-directed RNA polymerase II subunit RPB1 homolog | JBrowse |
| Muricea muricata | BRAKERXEIP00000011432.1 | AAA92868.1 | DNA-dependent RNA polymerase largest subunit [Lymphocystis disease virus 1] | Q6GZW7 Putative DNA-directed RNA polymerase 008R OS=Frog virus 3 (i | JBrowse |
| Muricea muricata | BRAKERXEIP00000016442.1 | GHV49454.1 | hypothetical protein AGMMS49579_01150 [Spirochaetia bacterium] | Q196X0 Probable DNA-directed RNA polymerase II subunit RPB1 homolog | JBrowse |
| Muricea muricata | BRAKERXEIP00000018213.1 | GHV49454.1 | hypothetical protein AGMMS49579_01150 [Spirochaetia bacterium] | Q196X0 Probable DNA-directed RNA polymerase II subunit RPB1 homolog | JBrowse |
| Muricea muricata | BRAKERXEIP00000034710.1 | MBT7243719.1 | hypothetical protein [Flavobacteriaceae bacterium] | P35084 DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium | JBrowse |
| Muricea muricata | BRAKERXEIP00000041270.1 | NBP58500.1 | hypothetical protein [bacterium] | Q6GZW7 Putative DNA-directed RNA polymerase 008R OS=Frog virus 3 (i | JBrowse |
