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This orthogroup contains 929 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 929 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10082 | INTEGRIN BETA SUBUNIT | 782 / 929 | 84.2% | 99.9% of 783 | ≥80% support |
| GO | GO:0005178 Molecular Function | integrin binding | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0005925 Cellular Component | focal adhesion | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0007160 Biological Process | cell-matrix adhesion | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0007229 Biological Process | integrin-mediated signaling pathway | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0008305 Cellular Component | integrin complex | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0009986 Cellular Component | cell surface | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0016477 Biological Process | cell migration | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0033627 Biological Process | cell adhesion mediated by integrin | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| Pfam | PF00362 | Integrin_beta — Integrin beta chain VWA domain | 670 / 929 | 72.1% | 85.6% of 783 | ≥50% support |
| Pfam | PF08725 | Integrin_b_cyt — Integrin beta cytoplasmic domain | 545 / 929 | 58.7% | 69.6% of 783 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000014097.1 | XP_047137118.1 | integrin beta-2 [Hydra vulgaris] | P12607 Integrin beta-1-B OS=Xenopus laevis OX=8355 GN=itgb1-b PE=2 | JBrowse |
| Mastigias papua | BRAKERKYLP00000015292.1 | XP_047137118.1 | integrin beta-2 [Hydra vulgaris] | P07228 Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1 | JBrowse |
| Mastigias papua | BRAKERKYLP00000019626.1 | AAG25994.1 | integrin beta chain [Podocoryna carnea] | P53713 Integrin beta-1 OS=Felis catus OX=9685 GN=ITGB1 PE=2 SV=1 | JBrowse |
