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This orthogroup contains 333 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 333 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 274 / 333 | 82.3% | 95.5% of 287 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 275 / 333 | 82.6% | 95.8% of 287 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 274 / 333 | 82.3% | 95.5% of 287 | ≥80% support |
| PANTHER | PTHR23189 | RNA RECOGNITION MOTIF-CONTAINING | 253 / 333 | 76.0% | 91.0% of 278 | ≥50% support |
| Pfam | PF07744 | SPOC | 228 / 333 | 68.5% | 79.4% of 287 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000013362.1 | XP_047138178.1 | msx2-interacting protein [Hydra vulgaris] | Q96T58 Msx2-interacting protein OS=Homo sapiens OX=9606 GN=SPEN PE= | JBrowse |
