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This orthogroup contains 304 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 304 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19858 | WD40 REPEAT PROTEIN | 273 / 304 | 89.8% | 100.0% of 273 | ≥80% support |
| GO | GO:0000028 Biological Process | ribosomal small subunit assembly | 273 / 304 | 89.8% | 100.0% of 273 | ≥80% support |
| GO | GO:0000462 Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 273 / 304 | 89.8% | 100.0% of 273 | ≥80% support |
| GO | GO:0032040 Cellular Component | small-subunit processome | 273 / 304 | 89.8% | 100.0% of 273 | ≥80% support |
| GO | GO:0034388 Cellular Component | Pwp2p-containing subcomplex of 90S preribosome | 273 / 304 | 89.8% | 100.0% of 273 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 251 / 304 | 82.6% | 91.9% of 273 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 239 / 304 | 78.6% | 89.9% of 266 | ≥50% support |
| Pfam | PF04003 | Utp12 | 216 / 304 | 71.1% | 81.2% of 266 | ≥50% support |
| KEGG | K14558 | PWP2, UTP1 — Ribosome biogenesis | 189 / 304 | 62.2% | 95.0% of 199 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000000746.1 | CAB3997185.1 | periodic tryptophan 2 homolog [Paramuricea clavata] | Q8BU03 Periodic tryptophan protein 2 homolog OS=Mus musculus OX=100 | JBrowse |
| Mastigias papua | BRAKERKYLP00000001040.1 | CAB4018041.1 | WD40 repeat, partial [Paramuricea clavata] | Q5RFQ3 Periodic tryptophan protein 2 homolog OS=Pongo abelii OX=960 | JBrowse |
| Mastigias papua | BRAKERKYLP00000001197.1 | XP_046852345.1 | periodic tryptophan protein 2 homolog isoform X1 [Xenia sp. Carnegie-2017] | Q8BU03 Periodic tryptophan protein 2 homolog OS=Mus musculus OX=100 | JBrowse |
| Mastigias papua | BRAKERKYLP00000001198.1 | XP_046852345.1 | periodic tryptophan protein 2 homolog isoform X1 [Xenia sp. Carnegie-2017] | Q5RFQ3 Periodic tryptophan protein 2 homolog OS=Pongo abelii OX=960 | JBrowse |
| Mastigias papua | BRAKERKYLP00000001603.1 | XP_046852347.1 | periodic tryptophan protein 2 homolog isoform X2 [Xenia sp. Carnegie-2017] | Q15269 Periodic tryptophan protein 2 homolog OS=Homo sapiens OX=960 | JBrowse |
| Mastigias papua | BRAKERKYLP00000026830.1 | CAB3997185.1 | periodic tryptophan 2 homolog [Paramuricea clavata] | Q5RFQ3 Periodic tryptophan protein 2 homolog OS=Pongo abelii OX=960 | JBrowse |
