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Support counts the member genes carrying the term. % of genes is that count over all 262 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13930 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE | 229 / 262 | 87.4% | 100.0% of 229 | ≥80% support |
| GO | GO:0008033 Biological Process | tRNA processing | 229 / 262 | 87.4% | 100.0% of 229 | ≥80% support |
| GO | GO:0051539 Molecular Function | 4 iron, 4 sulfur cluster binding | 229 / 262 | 87.4% | 100.0% of 229 | ≥80% support |
| GO | GO:0031591 Biological Process | wybutosine biosynthetic process | 225 / 262 | 85.9% | 98.3% of 229 | ≥80% support |
| Pfam | PF08608 | Wyosine_form — Wyosine base formation | 188 / 262 | 71.8% | 86.2% of 218 | ≥50% support |
| Pfam | PF00258 | Flavodoxin_1 — Flavodoxin | 184 / 262 | 70.2% | 84.4% of 218 | ≥50% support |
| Pfam | PF04055 | Radical_SAM — Radical SAM superfamily | 180 / 262 | 68.7% | 82.6% of 218 | ≥50% support |
| GO | GO:0003824 Molecular Function | catalytic activity | 191 / 262 | 72.9% | 83.4% of 229 | ≥50% support |
| GO | GO:0051536 Molecular Function | iron-sulfur cluster binding | 191 / 262 | 72.9% | 83.4% of 229 | ≥50% support |
| GO | GO:0010181 Molecular Function | FMN binding | 184 / 262 | 70.2% | 80.4% of 229 | ≥50% support |
| KEGG | K15449 | TYW1 — Transfer RNA biogenesis | 175 / 262 | 66.8% | 99.4% of 176 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000023913.1 | GBM53726.1 | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Araneus ventricosus] | Q9NV66 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine syn | JBrowse |
| Mastigias papua | BRAKERKYLP00000024011.1 | XP_033123183.1 | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like [Anneissia japonica] | Q9NV66 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine syn | JBrowse |
| Mastigias papua | BRAKERKYLP00000024064.1 | GBM53729.1 | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Araneus ventricosus] | Q8BJM7 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine syn | JBrowse |
