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This orthogroup contains 243 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 243 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10102 | DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL | 210 / 243 | 86.4% | 97.7% of 215 | ≥80% support |
| Pfam | PF00940 | RNA_pol — DNA-dependent RNA polymerase | 196 / 243 | 80.7% | 90.7% of 216 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 210 / 243 | 86.4% | 97.2% of 216 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 210 / 243 | 86.4% | 97.2% of 216 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 210 / 243 | 86.4% | 97.2% of 216 | ≥80% support |
| GO | GO:0006390 Biological Process | mitochondrial transcription | 210 / 243 | 86.4% | 97.2% of 216 | ≥80% support |
| GO | GO:0034245 Cellular Component | mitochondrial DNA-directed RNA polymerase complex | 210 / 243 | 86.4% | 97.2% of 216 | ≥80% support |
| GO | GO:0001018 Molecular Function | mitochondrial promoter sequence-specific DNA binding | 204 / 243 | 84.0% | 94.4% of 216 | ≥80% support |
| Pfam | PF14700 | RPOL_N — DNA-directed RNA polymerase N-terminal | 182 / 243 | 74.9% | 84.3% of 216 | ≥50% support |
| Pfam | PF13812 | PPR_3 — Pentatricopeptide repeat domain | 142 / 243 | 58.4% | 65.7% of 216 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 159 / 243 | 65.4% | 73.6% of 216 | ≥50% support |
| KEGG | K10908 | POLRMT, RPO41 — Mitochondrial biogenesis | 152 / 243 | 62.6% | 98.7% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000023821.1 | XP_047134645.1 | DNA-directed RNA polymerase, mitochondrial-like [Hydra vulgaris] | Q8BKF1 DNA-directed RNA polymerase, mitochondrial OS=Mus musculus O | JBrowse |
