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This orthogroup contains 239 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 239 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15138 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 | 195 / 239 | 81.6% | 99.0% of 197 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 195 / 239 | 81.6% | 92.9% of 210 | ≥80% support |
| GO | GO:0005669 Cellular Component | transcription factor TFIID complex | 195 / 239 | 81.6% | 92.9% of 210 | ≥80% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 195 / 239 | 81.6% | 92.9% of 210 | ≥80% support |
| GO | GO:0006367 Biological Process | transcription initiation at RNA polymerase II promoter | 195 / 239 | 81.6% | 92.9% of 210 | ≥80% support |
| GO | GO:0016251 Molecular Function | RNA polymerase II general transcription initiation factor activity | 195 / 239 | 81.6% | 92.9% of 210 | ≥80% support |
| Pfam | PF05236 | TAF4 | 187 / 239 | 78.2% | 89.5% of 209 | ≥50% support |
| Pfam | PF07531 | TAFH — NHR1 homology to TAF | 186 / 239 | 77.8% | 89.0% of 209 | ≥50% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 189 / 239 | 79.1% | 90.0% of 210 | ≥50% support |
| GO | GO:0046982 Molecular Function | protein heterodimerization activity | 177 / 239 | 74.1% | 84.3% of 210 | ≥50% support |
| KEGG | K03129 | TAF4 — Chromosome and associated proteins | 164 / 239 | 68.6% | 100.0% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000021332.1 | XP_002161903.3 | transcription initiation factor TFIID subunit 4 [Hydra vulgaris] | O00268 Transcription initiation factor TFIID subunit 4 OS=Homo sapi | JBrowse |
