← Back to the gene family browser
This orthogroup contains 224 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12313 | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 165 / 224 | 73.7% | 90.2% of 183 | ≥50% support |
| Pfam | PF00097 | zf-C3HC4 — Zinc finger, C3HC4 type (RING finger) | 142 / 224 | 63.4% | 86.6% of 164 | ≥50% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 168 / 224 | 75.0% | 96.0% of 175 | ≥50% support |
| GO | GO:0005783 Cellular Component | endoplasmic reticulum | 165 / 224 | 73.7% | 94.3% of 175 | ≥50% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 165 / 224 | 73.7% | 94.3% of 175 | ≥50% support |
| GO | GO:0044390 Molecular Function | ubiquitin-like protein conjugating enzyme binding | 165 / 224 | 73.7% | 94.3% of 175 | ≥50% support |
| GO | GO:0071712 Biological Process | obsolete ER-associated misfolded protein catabolic process | 165 / 224 | 73.7% | 94.3% of 175 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 142 / 224 | 63.4% | 81.1% of 175 | ≥50% support |
| KEGG | K10666 | RNF5_185 — Ubiquitin system | 139 / 224 | 62.1% | 99.3% of 140 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| No member of this family matches the current filter. | |||||
