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This orthogroup contains 212 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 212 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12465 | UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 | 181 / 212 | 85.4% | 99.5% of 182 | ≥80% support |
| Pfam | PF08612 | Med20 — TATA-binding related factor (TRF) of subunit 20 of Mediator complex | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 190 / 212 | 89.6% | 100.0% of 190 | ≥80% support |
| GO | GO:0003713 Molecular Function | transcription coactivator activity | 181 / 212 | 85.4% | 95.3% of 190 | ≥80% support |
| KEGG | K13528 | MED20 — Transcription machinery | 141 / 212 | 66.5% | 98.6% of 143 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000018508.1 | XP_015776309.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 20-like [Acropora digitifera] | Q5ZKY9 Mediator of RNA polymerase II transcription subunit 20 OS=Ga | JBrowse |
