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This orthogroup contains 182 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13681 | SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED | 108 / 182 | 59.3% | 90.0% of 120 | ≥50% support |
| Pfam | PF06003 | SMN_Tudor — Survival motor neuron protein (SMN), Tudor domain | 122 / 182 | 67.0% | 100.0% of 122 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 128 / 182 | 70.3% | 100.0% of 128 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 122 / 182 | 67.0% | 95.3% of 128 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 122 / 182 | 67.0% | 95.3% of 128 | ≥50% support |
| GO | GO:0006397 Biological Process | mRNA processing | 122 / 182 | 67.0% | 95.3% of 128 | ≥50% support |
| GO | GO:0000381 Biological Process | regulation of alternative mRNA splicing, via spliceosome | 103 / 182 | 56.6% | 80.5% of 128 | ≥50% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 103 / 182 | 56.6% | 80.5% of 128 | ≥50% support |
| KEGG | K12839 | SMNDC1, SPF30 — Spliceosome | 131 / 182 | 72.0% | 100.0% of 131 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Mastigias papua | BRAKERKYLP00000005596.1 | XP_028406005.1 | survival of motor neuron-related-splicing factor 30-like [Dendronephthya gigantea] | Q5R591 Survival of motor neuron-related-splicing factor 30 OS=Pongo | JBrowse |
