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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Metridium senile | ENSDTNP00000000583.1 | XP_020917531.1 | homeobox protein Hox-A5a [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Metridium senile | ENSDTNP00000002204.1 | XP_020917512.1 | pancreas/duodenum homeobox protein 1 [Exaiptasia diaphana] | P10178 Homeobox protein HB3 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Metridium senile | ENSDTNP00000005231.1 | XP_020917496.1 | GS homeobox 1 [Exaiptasia diaphana] | P31315 GS homeobox 1 OS=Mus musculus OX=10090 GN=Gsx1 PE=2 SV=2 | JBrowse |
| Metridium senile | ENSDTNP00000006883.1 | XP_020897531.1 | homeobox protein vent1B [Exaiptasia diaphana] | Q9YH71 Homeobox protein vent1B OS=Xenopus laevis OX=8355 GN=vent1B | JBrowse |
| Metridium senile | ENSDTNP00000010391.1 | XP_031548898.1 | NK1 transcription factor-related protein 1-like isoform X1 [Actinia tenebrosa] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Metridium senile | ENSDTNP00000010408.1 | XP_031548898.1 | NK1 transcription factor-related protein 1-like isoform X1 [Actinia tenebrosa] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Metridium senile | ENSDTNP00000011929.1 | XP_020900248.1 | homeobox protein HMX3 [Exaiptasia diaphana] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Metridium senile | ENSDTNP00000012089.1 | XP_020893391.1 | homeobox protein not2 [Exaiptasia diaphana] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Metridium senile | ENSDTNP00000012517.1 | XP_020895546.1 | homeobox protein Hox-B4 [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Metridium senile | ENSDTNP00000012547.1 | XP_020900265.1 | homeobox protein not2 [Exaiptasia diaphana] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Metridium senile | ENSDTNP00000012652.1 | XP_020913842.1 | homeobox protein EMX1 [Exaiptasia diaphana] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Metridium senile | ENSDTNP00000013508.1 | XP_020900234.1 | homeobox protein HMX3 [Exaiptasia diaphana] | Q504H8 Homeobox protein HMX3 OS=Danio rerio OX=7955 GN=hmx3 PE=2 SV | JBrowse |
| Metridium senile | ENSDTNP00000013596.1 | XP_031564399.1 | retinal homeobox protein Rx2-like [Actinia tenebrosa] | F1R2J1 Homeobox protein pnx OS=Danio rerio OX=7955 GN=pnx PE=1 SV=1 | JBrowse |
| Metridium senile | ENSDTNP00000013881.1 | XP_020897351.1 | homeobox protein MSX-2 [Exaiptasia diaphana] | Q2VL80 Homeobox protein MSX-1 (Fragment) OS=Perodicticus potto edwa | JBrowse |
| Metridium senile | ENSDTNP00000014544.1 | XP_020902127.1 | homeobox protein vex1 [Exaiptasia diaphana] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Metridium senile | ENSDTNP00000014843.1 | XP_020897055.2 | homeobox protein HMX3 [Exaiptasia diaphana] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Metridium senile | ENSDTNP00000015187.1 | XP_020898175.1 | ventral anterior homeobox 2b [Exaiptasia diaphana] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Metridium senile | ENSDTNP00000015822.1 | XP_020911083.1 | homeobox protein EMX1 [Exaiptasia diaphana] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Metridium senile | ENSDTNP00000017224.1 | XP_020917452.1 | homeobox protein ceh-9 [Exaiptasia diaphana] | O02491 Segmentation polarity homeobox protein engrailed OS=Anophele | JBrowse |
| Metridium senile | ENSDTNP00000018225.1 | XP_020905137.1 | homeobox protein ceh-19 [Exaiptasia diaphana] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
