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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_001628329.2 | XP_001628329.2 | transcription factor atoh8 [Nematostella vectensis] | Q96SQ7 Transcription factor ATOH8 OS=Homo sapiens OX=9606 GN=ATOH8 | JBrowse |
| Nematostella vectensis | XP_001632876.2 | XP_001632876.2 | heart- and neural crest derivatives-expressed protein 2 [Nematostella vectensis] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Nematostella vectensis | XP_001634988.2 | XP_001634988.2 | transcription factor 15 [Nematostella vectensis] | Q6QHK4 Factor in the germline alpha OS=Homo sapiens OX=9606 GN=FIGL | JBrowse |
| Nematostella vectensis | XP_032218720.1 | XP_032218720.1 | T-cell acute lymphocytic leukemia protein 1 [Nematostella vectensis] | Q90YI8 T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubr | JBrowse |
| Nematostella vectensis | XP_032218908.2 | XP_032218908.2 | T-cell acute lymphocytic leukemia protein 1 homolog [Nematostella vectensis] | O93507 T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio | JBrowse |
| Nematostella vectensis | XP_032225258.1 | XP_032225258.1 | achaete-scute homolog 4 [Nematostella vectensis] | Q6XD76 Achaete-scute homolog 4 OS=Homo sapiens OX=9606 GN=ASCL4 PE= | JBrowse |
| Nematostella vectensis | XP_032226875.2 | XP_032226875.2 | achaete-scute homolog 2 [Nematostella vectensis] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Nematostella vectensis | XP_032237760.2 | XP_032237760.2 | helix-loop-helix protein 2 isoform X3 [Nematostella vectensis] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Nematostella vectensis | XP_032237799.1 | XP_032237799.1 | heart- and neural crest derivatives-expressed protein 1 [Nematostella vectensis] | Q64279 Heart- and neural crest derivatives-expressed protein 1 OS=M | JBrowse |
| Nematostella vectensis | XP_032240324.1 | XP_032240324.1 | twist-related protein [Nematostella vectensis] | P13903 Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE | JBrowse |
| Nematostella vectensis | XP_032240365.1 | XP_032240365.1 | transcription factor 15 [Nematostella vectensis] | P79782 Transcription factor 15 OS=Gallus gallus OX=9031 GN=TCF15 PE | JBrowse |
| Nematostella vectensis | XP_032240383.2 | XP_032240383.2 | uncharacterized protein LOC116619576 [Nematostella vectensis] | – | JBrowse |
| Nematostella vectensis | XP_032241075.1 | XP_032241075.1 | transcription factor Atoh1 [Nematostella vectensis] | P48985 Transcription factor Atoh1 OS=Mus musculus OX=10090 GN=Atoh1 | JBrowse |
| Nematostella vectensis | XP_032241076.1 | XP_032241076.1 | transcription factor Atoh1 [Nematostella vectensis] | Q60430 Neurogenic differentiation factor 1 OS=Mesocricetus auratus | JBrowse |
| Nematostella vectensis | XP_032241387.2 | XP_032241387.2 | pancreas transcription factor 1 subunit alpha [Nematostella vectensis] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
| Nematostella vectensis | XP_048578975.1 | XP_048578975.1 | helix-loop-helix protein 2 isoform X1 [Nematostella vectensis] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Nematostella vectensis | XP_048578976.1 | XP_032237760.2 | helix-loop-helix protein 2 isoform X3 [Nematostella vectensis] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Nematostella vectensis | XP_048580329.1 | XP_048580329.1 | pancreas transcription factor 1 subunit alpha-like [Nematostella vectensis] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
| Nematostella vectensis | XP_048587899.1 | XP_048587899.1 | T-cell acute lymphocytic leukemia protein 1-like [Nematostella vectensis] | Q90YI8 T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubr | JBrowse |
