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Support counts the member genes carrying the term. % of genes is that count over all 576 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11793 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0000790 Cellular Component | chromatin | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0005667 Cellular Component | transcription regulator complex | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 483 / 576 | 83.9% | 100.0% of 483 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 468 / 576 | 81.3% | 96.9% of 483 | ≥80% support |
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 460 / 576 | 79.9% | 100.0% of 460 | ≥50% support |
| KEGG | K15603 | TCF4_12 — Transcription factors | 335 / 576 | 58.2% | 100.0% of 335 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_001633093.2 | XP_001633093.2 | transcription factor 12 isoform X8 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238049.1 | XP_032238049.1 | transcription factor 12 isoform X1 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238050.1 | XP_032238050.1 | transcription factor 12 isoform X2 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238051.1 | XP_032238051.1 | transcription factor 12 isoform X3 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238052.1 | XP_032238049.1 | transcription factor 12 isoform X1 [Nematostella vectensis] | Q62655 Transcription factor 4 OS=Rattus norvegicus OX=10116 GN=Tcf4 | JBrowse |
| Nematostella vectensis | XP_032238053.1 | XP_032238053.1 | transcription factor 12 isoform X5 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238055.1 | XP_032238055.1 | transcription factor 12 isoform X6 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238056.1 | XP_032238056.1 | transcription factor 12 isoform X7 [Nematostella vectensis] | Q60722 Transcription factor 4 OS=Mus musculus OX=10090 GN=Tcf4 PE=1 | JBrowse |
| Nematostella vectensis | XP_032238057.1 | XP_032238057.1 | transcription factor 12 isoform X9 [Nematostella vectensis] | Q62655 Transcription factor 4 OS=Rattus norvegicus OX=10116 GN=Tcf4 | JBrowse |
