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Support counts the member genes carrying the term. % of genes is that count over all 524 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46040 | HIGH MOBILITY GROUP PROTEIN 2 | 477 / 524 | 91.0% | 99.4% of 480 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 448 / 524 | 85.5% | 97.0% of 462 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 478 / 524 | 91.2% | 99.6% of 480 | ≥80% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 477 / 524 | 91.0% | 99.4% of 480 | ≥80% support |
| KEGG | K24660 | HMG20A — Chromosome and associated proteins | 276 / 524 | 52.7% | 99.3% of 278 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_032220116.1 | XP_032220116.1 | high mobility group protein 20A [Nematostella vectensis] | Q5ZKF4 High mobility group protein 20A OS=Gallus gallus OX=9031 GN= | JBrowse |
| Nematostella vectensis | XP_032222630.2 | XP_032222630.2 | high mobility group protein 20A [Nematostella vectensis] | Q32L68 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Nematostella vectensis | XP_032238090.2 | XP_032238090.2 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X2 [Nematostella vectensis] | Q9NP66 High mobility group protein 20A OS=Homo sapiens OX=9606 GN=H | JBrowse |
| Nematostella vectensis | XP_032238091.2 | XP_032238091.2 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X3 [Nematostella vectensis] | Q9NP66 High mobility group protein 20A OS=Homo sapiens OX=9606 GN=H | JBrowse |
| Nematostella vectensis | XP_032238092.2 | XP_032238092.2 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X4 [Nematostella vectensis] | Q32L68 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Nematostella vectensis | XP_048581574.1 | XP_048581574.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1 [Nematostella vectensis] | Q9NP66 High mobility group protein 20A OS=Homo sapiens OX=9606 GN=H | JBrowse |
