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Support counts the member genes carrying the term. % of genes is that count over all 280 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12537 | RNA BINDING PROTEIN PUMILIO-RELATED | 231 / 280 | 82.5% | 98.7% of 234 | ≥80% support |
| Pfam | PF00806 | PUF — Pumilio-family RNA binding repeat | 231 / 280 | 82.5% | 98.7% of 234 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 233 / 280 | 83.2% | 99.6% of 234 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 232 / 280 | 82.9% | 99.2% of 234 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 231 / 280 | 82.5% | 98.7% of 234 | ≥80% support |
| GO | GO:0010608 Biological Process | post-transcriptional regulation of gene expression | 231 / 280 | 82.5% | 98.7% of 234 | ≥80% support |
| GO | GO:0003730 Molecular Function | mRNA 3'-UTR binding | 229 / 280 | 81.8% | 97.9% of 234 | ≥80% support |
| KEGG | K17943 | PUM — Spinocerebellar ataxia | 224 / 280 | 80.0% | 99.6% of 225 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_001634869.2 | XP_001634869.2 | pumilio homolog 2 isoform X1 [Nematostella vectensis] | Q80U58 Pumilio homolog 2 OS=Mus musculus OX=10090 GN=Pum2 PE=1 SV=2 | JBrowse |
| Nematostella vectensis | XP_032240209.1 | XP_032240209.1 | pumilio homolog 2 isoform X2 [Nematostella vectensis] | E3WDQ9 Pumilio homolog 2 OS=Xenopus laevis OX=8355 GN=pum2 PE=1 SV= | JBrowse |
| Nematostella vectensis | XP_032240210.1 | XP_032240210.1 | pumilio homolog 2 isoform X4 [Nematostella vectensis] | Q80U58 Pumilio homolog 2 OS=Mus musculus OX=10090 GN=Pum2 PE=1 SV=2 | JBrowse |
| Nematostella vectensis | XP_048590682.1 | XP_048590682.1 | pumilio homolog 2 isoform X3 [Nematostella vectensis] | Q80U58 Pumilio homolog 2 OS=Mus musculus OX=10090 GN=Pum2 PE=1 SV=2 | JBrowse |
