← Back to the gene family browser
This orthogroup contains 270 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 270 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF19729 | FBXL18_LRR — F-box/LRR-repeat protein 18, LRR | 233 / 270 | 86.3% | 97.1% of 240 | ≥80% support |
| GO | GO:0031146 Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 236 / 270 | 87.4% | 98.3% of 240 | ≥80% support |
| Pfam | PF12937 | F-box-like | 167 / 270 | 61.9% | 69.6% of 240 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 173 / 270 | 64.1% | 72.1% of 240 | ≥50% support |
| GO | GO:0019005 Cellular Component | SCF ubiquitin ligase complex | 137 / 270 | 50.7% | 57.1% of 240 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Nematostella vectensis | XP_032225239.2 | XP_032225239.2 | uncharacterized protein LOC5500977 isoform X2 [Nematostella vectensis] | – | JBrowse |
| Nematostella vectensis | XP_032231429.2 | XP_032231429.2 | uncharacterized protein LOC5507066 [Nematostella vectensis] | Q96ME1 F-box/LRR-repeat protein 18 OS=Homo sapiens OX=9606 GN=FBXL1 | JBrowse |
| Nematostella vectensis | XP_048588115.1 | XP_048588115.1 | uncharacterized protein LOC5500977 isoform X1 [Nematostella vectensis] | – | JBrowse |
