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This orthogroup contains 233 genes from 133 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 233 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | zf-RING_2 — Ring finger domain | 178 / 233 | 76.4% | 90.4% of 197 | ≥50% support |
| Pfam | PF02225 | PA | 120 / 233 | 51.5% | 60.9% of 197 | ≥50% support |
| KEGG | K15692 | RNF13, RZF — Ubiquitin system | 132 / 233 | 56.7% | 97.8% of 135 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Pocillopora acuta | Pocillopora_acuta_HIv2___TS.g24430.t1 | XP_027040514.1 | E3 ubiquitin-protein ligase RNF13-like [Pocillopora damicornis] | Q0VD51 E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX=9913 GN=R | JBrowse |
