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Support counts the member genes carrying the term. % of genes is that count over all 2,252 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 1928 / 2,252 | 85.6% | 97.9% of 1,970 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1977 / 2,252 | 87.8% | 99.8% of 1,982 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1923 / 2,252 | 85.4% | 97.0% of 1,982 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1851 / 2,252 | 82.2% | 93.4% of 1,982 | ≥80% support |
| PANTHER | PTHR24329 | HOMEOBOX PROTEIN ARISTALESS | 1394 / 2,252 | 61.9% | 71.5% of 1,951 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1765 / 2,252 | 78.4% | 89.1% of 1,982 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1404 / 2,252 | 62.3% | 70.8% of 1,982 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Pocillopora damicornis | RMX38700.1 | none | Q9I9A2 Retinal homeobox protein Rx2 OS=Oryzias latipes OX=8090 GN=r | JBrowse | |
| Pocillopora damicornis | RMX40815.1 | none | Q61412 Visual system homeobox 2 OS=Mus musculus OX=10090 GN=Vsx2 PE | JBrowse | |
| Pocillopora damicornis | RMX43567.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX43579.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX46443.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX48173.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX51959.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56474.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX58089.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX58092.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX58820.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX60691.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX60888.1 | none | – | JBrowse |
