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Support counts the member genes carrying the term. % of genes is that count over all 2,234 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01410 | COLFI — Fibrillar collagen C-terminal domain | 1918 / 2,234 | 85.9% | 94.4% of 2,032 | ≥80% support |
| GO | GO:0005201 Molecular Function | extracellular matrix structural constituent | 1932 / 2,234 | 86.5% | 96.1% of 2,010 | ≥80% support |
| PANTHER | PTHR24023 | COLLAGEN ALPHA | 1668 / 2,234 | 74.7% | 94.7% of 1,762 | ≥50% support |
| Pfam | PF01391 | Collagen | 1660 / 2,234 | 74.3% | 81.7% of 2,032 | ≥50% support |
| GO | GO:0005615 Cellular Component | extracellular space | 1669 / 2,234 | 74.7% | 83.0% of 2,010 | ≥50% support |
| GO | GO:0031012 Cellular Component | extracellular matrix | 1668 / 2,234 | 74.7% | 83.0% of 2,010 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Pocillopora damicornis | RMX38707.1 | none | Q9JI03 Collagen alpha-1(V) chain OS=Rattus norvegicus OX=10116 GN=C | JBrowse | |
| Pocillopora damicornis | RMX38710.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX40037.1 | none | Q28668 Collagen alpha-2(I) chain (Fragment) OS=Oryctolagus cuniculu | JBrowse | |
| Pocillopora damicornis | RMX46522.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX54107.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX54110.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56333.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56341.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56342.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56377.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX56379.1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX57453.1 | none | – | JBrowse |
