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This orthogroup contains 271 genes from 94 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 271 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46055 | CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT | 247 / 271 | 91.1% | 99.2% of 249 | ≥80% support |
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 238 / 271 | 87.8% | 95.2% of 250 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 249 / 271 | 91.9% | 99.2% of 251 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 249 / 271 | 91.9% | 99.2% of 251 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 249 / 271 | 91.9% | 99.2% of 251 | ≥80% support |
| GO | GO:0032922 Biological Process | circadian regulation of gene expression | 247 / 271 | 91.1% | 98.4% of 251 | ≥80% support |
| GO | GO:1990513 Cellular Component | CLOCK-BMAL transcription complex | 247 / 271 | 91.1% | 98.4% of 251 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 240 / 271 | 88.6% | 95.6% of 251 | ≥80% support |
| Pfam | PF00989 | PAS | 176 / 271 | 64.9% | 70.4% of 250 | ≥50% support |
| Pfam | PF14598 | PAS_11 — PAS domain | 168 / 271 | 62.0% | 67.2% of 250 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 183 / 271 | 67.5% | 72.9% of 251 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| No member of this family matches the current filter. | |||||
