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This orthogroup contains 242 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 242 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10142 | DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0000110 Cellular Component | nucleotide-excision repair factor 1 complex | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0000715 Biological Process | nucleotide-excision repair, DNA damage recognition | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0003684 Molecular Function | damaged DNA binding | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0006284 Biological Process | base-excision repair | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0006289 Biological Process | nucleotide-excision repair | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0033683 Biological Process | obsolete nucleotide-excision repair, DNA incision | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:0070914 Biological Process | UV-damage excision repair | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| GO | GO:1901255 Biological Process | nucleotide-excision repair involved in interstrand cross-link repair | 208 / 242 | 86.0% | 99.5% of 209 | ≥80% support |
| Pfam | PF05181 | XPA_C — XPA protein C-terminus | 187 / 242 | 77.3% | 93.5% of 200 | ≥50% support |
| Pfam | PF01286 | XPA_N — XPA protein N-terminal | 178 / 242 | 73.6% | 89.0% of 200 | ≥50% support |
| KEGG | K10847 | XPA — DNA repair and recombination proteins | 160 / 242 | 66.1% | 99.4% of 161 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Pachyseris speciosa | pspe_0.1.m1.23132.m1 | CAH3042975.1 | unnamed protein product [Porites lobata] | Q64267 DNA repair protein complementing XP-A cells homolog OS=Mus m | JBrowse |
