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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g10205 | KXJ28028.1 | Homeobox protein not2 [Exaiptasia diaphana] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g10236 | XP_031551059.1 | homeobox protein ceh-13-like [Actinia tenebrosa] | P10178 Homeobox protein HB3 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g10744 | XP_020913842.1 | homeobox protein EMX1 [Exaiptasia diaphana] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g12065 | XP_020895075.1 | homeobox protein Hox-B4 [Exaiptasia diaphana] | P39021 Homeobox protein MOX-2 OS=Xenopus laevis OX=8355 GN=meox2 PE | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g12066 | XP_020895074.1 | homeobox protein Hox-A3 [Exaiptasia diaphana] | P32442 Homeobox protein MOX-1 OS=Mus musculus OX=10090 GN=Meox1 PE= | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g12067 | XP_031562655.1 | homeobox protein MOX-1-like [Actinia tenebrosa] | F1Q4R9 Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g12068 | XP_020895089.1 | homeobox protein MOX-2 [Exaiptasia diaphana] | F1Q4R9 Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g13390 | none | – | JBrowse | |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g13499 | XP_020897055.2 | homeobox protein HMX3 [Exaiptasia diaphana] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g17212 | XP_020907161.1 | homeobox protein MOX-2 [Exaiptasia diaphana] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g17567 | XP_020898130.1 | transcription factor LBX2-like [Exaiptasia diaphana] | P22809 Homeobox protein bagpipe OS=Drosophila melanogaster OX=7227 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g18275 | XP_020911083.1 | homeobox protein EMX1 [Exaiptasia diaphana] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g19993 | XP_020900242.1 | homeobox protein Nkx-6.1 [Exaiptasia diaphana] | Q99MA9 Homeobox protein Nkx-6.1 OS=Mus musculus OX=10090 GN=Nkx6-1 | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g19994 | XP_031555660.1 | homeobox protein HMX3-A-like [Actinia tenebrosa] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g19995 | XP_031554569.1 | homeobox protein ceh-19-like [Actinia tenebrosa] | O43763 T-cell leukemia homeobox protein 2 OS=Homo sapiens OX=9606 G | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g19996 | XP_031548898.1 | NK1 transcription factor-related protein 1-like isoform X1 [Actinia tenebrosa] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g19997 | XP_031555327.1 | homeobox protein HMX3-like [Actinia tenebrosa] | Q504H8 Homeobox protein HMX3 OS=Danio rerio OX=7955 GN=hmx3 PE=2 SV | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g21244 | XP_020896154.1 | brain-specific homeobox protein homolog [Exaiptasia diaphana] | – | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g21245 | XP_020896154.1 | brain-specific homeobox protein homolog [Exaiptasia diaphana] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Paraphelliactis xishaensis sp. nov. | HK74SY85_g21247 | XP_020917364.1 | homeobox protein unplugged [Exaiptasia diaphana] | Q14549 Homeobox protein GBX-1 OS=Homo sapiens OX=9606 GN=GBX1 PE=1 | JBrowse |
