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Support counts the member genes carrying the term. % of genes is that count over all 63 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30273 | PERIPLASMIC SIGNAL SENSOR AND SIGMA FACTOR ACTIVATOR FECR-RELATED | 44 / 63 | 69.8% | 73.3% of 60 | ≥50% support |
| Pfam | PF04773 | FecR | 45 / 63 | 71.4% | 73.8% of 61 | ≥50% support |
| Pfam | PF16220 | DUF4880 | 37 / 63 | 58.7% | 60.7% of 61 | ≥50% support |
| GO | GO:0016989 Molecular Function | sigma factor antagonist activity | 44 / 63 | 69.8% | 71.0% of 62 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 32 / 63 | 50.8% | 51.6% of 62 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G50890 | WP_110968775.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50909 | WP_175650777.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G50912 | WP_203652496.1 | FecR domain-containing protein [Pseudomonas sp. RtIB026] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50922 | WP_265969532.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas sp. DCB_AW] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50923 | WP_201178286.1 | FecR domain-containing protein [Pseudomonas sp. S31] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50947 | WP_175650814.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G50960 | WP_274888740.1 | FecR domain-containing protein [Pseudomonas sp. ITEM 17296] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50963 | QBF29109.1 | FecR family protein [Pseudomonas tructae] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51005 | WP_175650753.1 | FecR family protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51114 | WP_225422531.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51115 | WP_110971146.1 | FecR family protein [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51143 | WP_177431634.1 | FecR domain-containing protein [Pseudomonas huaxiensis] | P03030 Transcriptional activator protein LysR OS=Escherichia coli ( | JBrowse |
| Hydra oligactis | HOLI00001.G51728 | WP_110971779.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51729 | WP_175652233.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51956 | WP_175652365.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G51967 | WP_110969680.1 | FecR family protein [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G51972 | WP_110969674.1 | FecR domain-containing protein [Pseudomonas huaxiensis] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G51981 | WP_175652082.1 | DUF4880 domain-containing protein [Pseudomonas sp. Marseille-P9899] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52027 | WP_163940998.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas brassicae] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G52028 | WP_225839589.1 | FecR domain-containing protein [Pseudomonas sp. MM211] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
