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Support counts the member genes carrying the term. % of genes is that count over all 63 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30273 | PERIPLASMIC SIGNAL SENSOR AND SIGMA FACTOR ACTIVATOR FECR-RELATED | 44 / 63 | 69.8% | 73.3% of 60 | ≥50% support |
| Pfam | PF04773 | FecR | 45 / 63 | 71.4% | 73.8% of 61 | ≥50% support |
| Pfam | PF16220 | DUF4880 | 37 / 63 | 58.7% | 60.7% of 61 | ≥50% support |
| GO | GO:0016989 Molecular Function | sigma factor antagonist activity | 44 / 63 | 69.8% | 71.0% of 62 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 32 / 63 | 50.8% | 51.6% of 62 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G52031 | WP_110973260.1 | FecR domain-containing protein [Pseudomonas huaxiensis] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52175 | WP_262154044.1 | MULTISPECIES: FecR domain-containing protein [unclassified Pseudomonas] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52265 | WP_065832227.1 | FecR domain-containing protein [Pseudomonas syringae] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52397 | HCN45480.1 | siderophore-interacting protein [Pseudomonas sp.] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52398 | HCN45479.1 | RNA polymerase subunit sigma [Pseudomonas sp.] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G52454 | WP_262129276.1 | MULTISPECIES: FecR family protein [unclassified Pseudomonas] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G52613 | WP_095156370.1 | FecR family protein [Pseudomonas sp. Irchel 3E13] | – | JBrowse |
| Hydra oligactis | HOLI00001.G52714 | WP_110970700.1 | DUF4880 domain-containing protein [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G52715 | WP_110970699.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas huaxiensis] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G53150 | WP_110972010.1 | FecR domain-containing protein [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53539 | WP_256680203.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G53553 | WP_262129223.1 | FecR domain-containing protein [Pseudomonas sp. 5P_5.1_Bac1] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53652 | WP_175653171.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53667 | WP_175653155.1 | FecR domain-containing protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53733 | WP_042120865.1 | FecR family protein [Pseudomonas japonica] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53860 | WP_095154267.1 | FecR domain-containing protein [Pseudomonas sp. Irchel 3E13] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00014.G10127 | WP_105259379.1 | sigma-70 family RNA polymerase sigma factor [Rhodoferax sp. TS-BS-61-7] | – | JBrowse |
| Hydra oligactis | HOLI00014.G10128 | WP_105259378.1 | DUF4880 domain-containing protein [Rhodoferax sp. TS-BS-61-7] | – | JBrowse |
| Hydra oligactis | HOLI00059.G25542 | MBX9816764.1 | FecR domain-containing protein [Burkholderiaceae bacterium] | – | JBrowse |
| Hydra oligactis | HOLI00504.G55182 | WP_262129098.1 | FecR domain-containing protein [Pseudomonas sp. 5P_5.1_Bac1] | – | JBrowse |
