About Exaiptasia diaphana

Exaiptasia diaphana (formerly Aiptasia pallida) is the most important model organism for studying cnidarian-Symbiodiniaceae photosymbiosis (family Exaiptasiidae), a small transparent sea anemone that can harbor a variety of Symbiodiniaceae strains and can be experimentally bleached and re-infected in the laboratory, enabling controlled studies of symbiosis onset, breakdown, and specificity. It remains the primary model for mechanistic investigations of coral bleaching at the molecular level. Genomic data have been generated for this species and are available in public databases, enabling comparative studies of cnidarian evolution and ecology.

 Basic Information
ClassSpeciesNCBI Taxonomy IDAssembly LevelGenBank AssemblyAssembly NameGenome Size (Mb)WGS AccessionSubmitterBioProject
HexacoralliaExaiptasia diaphana2652724ScaffoldGCA_001417965.1Aiptasia genome 1.1244.27LJWW01KAUSTPRJNA261862

 Genome Assembly Information
Chromosome NumberScaffold NumberContig NumberProtein NumberProtein-Coding Gene NumberContig N50Scaffold N50GC content (%)BUSCO completeness
-43122975026789260421440144214536.5C:94.9%[S:92.8%,D:2.1%],F:3.7%,M:1.4%

 References
TitleJournalPubmed ID
The genome of Aiptasia, a sea anemone model for coral symbiosis.Proceedings of the National Academy of Sciences of the United States of America26324906
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