About Palythoa umbrosa

Palythoa umbrosa is a shade-tolerant zoantharian (family Sphenopidae) found in shallow to moderately deep reef environments across the Indo-Pacific, typically inhabiting overhangs, crevices, and shaded reef walls where light intensity is reduced. Like other Palythoa species, it incorporates foreign particles into the coenenchyme and may produce palytoxin-related compounds. Its preference for shaded habitats distinguishes it ecologically from many congeners that occupy exposed reef flats. Genomic data have been generated for this species and are available in public databases, enabling comparative studies of cnidarian evolution and ecology.

 Basic Information
ClassSpeciesNCBI Taxonomy IDAssembly LevelGenBank AssemblyAssembly NameGenome Size (Mb)WGS AccessionSubmitterBioProject
HexacoralliaPalythoa umbrosa1565477ContigGCA_042854165.1Pumb_1.0304.89BAACCE01Marine Genomics Unit, Okinawa Institute of Science and TechnologyPRJDB18008

 Genome Assembly Information
Chromosome NumberScaffold NumberContig NumberProtein NumberProtein-Coding Gene NumberContig N50Scaffold N50GC content (%)BUSCO completeness
-2838283824,80024,80023761423761437C:91.5%[S:89.9%,D:1.6%],F:4.9%,M:3.6%

 References
TitleJournalPubmed ID
Azooxanthellate Palythoa (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in HexacoralsGenome Biology and Evolution39240721
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