
Palythoa umbrosa is a shade-tolerant zoantharian (family Sphenopidae) found in shallow to moderately deep reef environments across the Indo-Pacific, typically inhabiting overhangs, crevices, and shaded reef walls where light intensity is reduced. Like other Palythoa species, it incorporates foreign particles into the coenenchyme and may produce palytoxin-related compounds. Its preference for shaded habitats distinguishes it ecologically from many congeners that occupy exposed reef flats. Genomic data have been generated for this species and are available in public databases, enabling comparative studies of cnidarian evolution and ecology.
| Class | Species | NCBI Taxonomy ID | Assembly Level | GenBank Assembly | Assembly Name | Genome Size (Mb) | WGS Accession | Submitter | BioProject |
|---|---|---|---|---|---|---|---|---|---|
| Hexacorallia | Palythoa umbrosa | 1565477 | Contig | GCA_042854165.1 | Pumb_1.0 | 304.89 | BAACCE01 | Marine Genomics Unit, Okinawa Institute of Science and Technology | PRJDB18008 |
| Chromosome Number | Scaffold Number | Contig Number | Protein Number | Protein-Coding Gene Number | Contig N50 | Scaffold N50 | GC content (%) | BUSCO completeness |
|---|---|---|---|---|---|---|---|---|
| - | 2838 | 2838 | 24,800 | 24,800 | 237614 | 237614 | 37 | C:91.5%[S:89.9%,D:1.6%],F:4.9%,M:3.6% |
| Title | Journal | Pubmed ID |
|---|---|---|
| Azooxanthellate Palythoa (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in Hexacorals | Genome Biology and Evolution | 39240721 |