Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Amil_Amillepora01510 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_3 1 XP_029213364.2 (Amil_Amillepora16102) 14.51 13.7 100.0% feature · violin
gland_3 2 Amil_Amillepora06582 not mapped 11.26 13.3 96.8% feature · violin
gland_3 3 XP_029213395.2 (Amil_Amillepora16103) 13.73 13.1 95.2% feature · violin
gland_3 4 XP_029194867.1 (Amil_Amillepora02641) 14.73 13.1 95.2% feature · violin
gland_3 5 Amil_orphan_304 not mapped 14.52 13.1 95.2% feature · violin
gland_3 6 XP_029213362.2 (Amil_Amillepora16099) 10.63 13.1 95.2% feature · violin
gland_3 7 Amil_orphan_7041 not mapped 11.74 12.6 92.1% feature · violin
gland_3 8 XP_029182740.2 (Amil_Amillepora08472) 9.09 12.6 92.1% feature · violin
gland_3 9 Amil_Amillepora29155 not mapped 12.77 12.4 90.5% feature · violin
gland_3 10 Amil_Amillepora21375 not mapped 13.79 12.2 88.9% feature · violin
gland_3 11 XP_029179238.1 (Amil_Amillepora26526) 14.75 12.2 88.9% feature · violin
gland_3 12 Amil_orphan_3057 not mapped 14.06 12.0 87.3% feature · violin
gland_3 13 Amil_orphan_996 not mapped 13.82 11.1 81.0% feature · violin
gland_3 14 Amil_orphan_995 not mapped 13.36 11.1 81.0% feature · violin
gland_3 15 Amil_Amillepora36588 not mapped 11.68 10.5 76.2% feature · violin
gland_3 16 XP_029200344.2 (Amil_Amillepora06584) 9.61 10.4 76.2% feature · violin
gland_3 17 XP_029191435.2 (Amil_Amillepora23439) 12.21 10.2 74.6% feature · violin
gland_3 18 XP_044181159.1 (Amil_Amillepora20691) 12.83 10.0 73.0% feature · violin
gland_3 19 XP_044184643.1 (Amil_Amillepora13192) 10.13 10.0 73.0% feature · violin
gland_3 20 Amil_orphan_998 not mapped 10.42 10.0 73.0% feature · violin
gland_3 21 Amil_orphan_9111 not mapped 8.87 10.0 73.0% feature · violin
gland_3 22 XP_044170093.1 (Amil_Amillepora35605) 11.56 9.8 71.4% feature · violin
gland_3 23 XP_044174466.1 (Amil_Amillepora09484) 14.42 9.4 68.3% feature · violin
gland_3 24 XP_029213363.2 (Amil_Amillepora16101) 14.01 9.4 68.3% feature · violin
gland_3 25 XP_029186916.2 (Amil_Amillepora10330) 9.12 9.1 66.7% feature · violin
gland_3 26 Amil_orphan_8270 not mapped 3.54 8.8 77.8% feature · violin
gland_3 27 XP_029206855.2 (Amil_Amillepora35342) 12.79 8.5 61.9% feature · violin
gland_3 28 XP_029213265.2 (Amil_Amillepora25129) 6.29 8.3 61.9% feature · violin
gland_3 29 XP_029179380.2 (Amil_Amillepora12924) 11.68 7.8 57.1% feature · violin
gland_3 30 XP_029184828.2 (Amil_Amillepora26247) 7.41 7.5 55.6% feature · violin
gland_3 31 Amil_orphan_871 not mapped 3.69 7.5 65.1% feature · violin
gland_3 32 Amil_Amillepora02640 not mapped 15.31 7.4 54.0% feature · violin
gland_3 33 XP_029180379.1 (Amil_Amillepora32639) 11.83 7.4 54.0% feature · violin
gland_3 34 Amil_orphan_4699 not mapped 8.79 7.4 54.0% feature · violin
gland_3 35 XP_029213407.1 (Amil_Amillepora06104) 11.63 7.2 52.4% feature · violin
gland_3 36 XP_044162768.1 (Amil_Amillepora02735) 3.19 7.0 66.7% feature · violin
gland_3 37 Amil_orphan_8966 not mapped 13.45 7.0 50.8% feature · violin
gland_3 38 XP_044170129.1 (Amil_Amillepora35676) 10.00 7.0 50.8% feature · violin
gland_3 39 XP_044168443.1 (Amil_Amillepora37002) 11.19 6.8 49.2% feature · violin
gland_3 40 XP_029182191.2 (Amil_Amillepora01510) 11.50 6.7 49.2% feature · violin
gland_3 41 XP_029191130.1 (Amil_Amillepora08761) 4.62 6.6 52.4% feature · violin
gland_3 42 Amil_Amillepora33098 not mapped 11.19 6.3 46.0% feature · violin
gland_3 43 XP_044181226.1 (Amil_Amillepora01511) 10.77 6.3 46.0% feature · violin
gland_3 44 XP_029193811.2 (Amil_Amillepora06485) 10.57 5.9 42.9% feature · violin
gland_3 45 XP_029187215.1 (Amil_Amillepora24842) 8.82 5.4 39.7% feature · violin
gland_3 46 XP_044181159.1 (Amil_Amillepora20692) 11.83 5.2 38.1% feature · violin
gland_3 47 Amil_Amillepora14296 not mapped 3.86 5.1 41.3% feature · violin
gland_3 48 XP_029194936.2 (Amil_Amillepora12236) 12.00 5.0 36.5% feature · violin
gland_3 49 Amil_Amillepora21133 not mapped 8.90 5.0 36.5% feature · violin
gland_3 50 XP_029191496.2 (Amil_Amillepora23438) 7.99 5.0 36.5% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Acropora millepora, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 19 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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