Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora03123 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
immune_3 1 Amil_Amillepora07698 13.49 13.1 100.0% feature · violin
immune_3 2 Amil_Amillepora07752 14.60 13.1 100.0% feature · violin
immune_3 3 Amil_Amillepora12517 14.96 13.1 100.0% feature · violin
immune_3 4 Amil_orphan_7061 10.40 12.9 100.0% feature · violin
immune_3 5 Amil_Amillepora08786 12.13 12.8 98.2% feature · violin
immune_3 6 Amil_Amillepora32297 9.03 12.8 98.2% feature · violin
immune_3 7 Amil_Amillepora26130 13.58 12.6 96.5% feature · violin
immune_3 8 Amil_Amillepora07750 13.84 12.6 96.5% feature · violin
immune_3 9 Amil_Amillepora22384 3.51 12.5 100.0% feature · violin
immune_3 10 Amil_Amillepora28966 10.29 12.4 94.7% feature · violin
immune_3 11 Amil_Amillepora13159 4.03 12.3 100.0% feature · violin
immune_3 12 Amil_Amillepora32633 6.18 12.3 100.0% feature · violin
immune_3 13 Amil_Amillepora16671 4.43 12.2 98.2% feature · violin
immune_3 14 Amil_Amillepora15207 4.67 12.0 100.0% feature · violin
immune_3 15 Amil_Amillepora25575 7.52 12.0 93.0% feature · violin
immune_3 16 Amil_Amillepora20876 7.03 12.0 93.0% feature · violin
immune_3 17 Amil_Amillepora24391 2.88 11.9 100.0% feature · violin
immune_3 18 Amil_Amillepora01370 4.39 11.9 98.2% feature · violin
immune_3 19 Amil_Amillepora08612 10.27 11.9 91.2% feature · violin
immune_3 20 Amil_Amillepora07717 3.35 11.8 100.0% feature · violin
immune_3 21 Amil_Amillepora05377 6.74 11.8 93.0% feature · violin
immune_3 22 Amil_Amillepora04319 5.23 11.7 94.7% feature · violin
immune_3 23 Amil_Amillepora31040 4.10 11.5 100.0% feature · violin
immune_3 24 Amil_orphan_7853 12.27 11.5 87.7% feature · violin
immune_3 25 Amil_Amillepora01369 5.23 11.4 93.0% feature · violin
immune_3 26 Amil_Amillepora08479 2.78 11.3 100.0% feature · violin
immune_3 27 Amil_Amillepora04977 3.43 11.3 100.0% feature · violin
immune_3 28 Amil_Amillepora09030 4.71 11.3 94.7% feature · violin
immune_3 29 Amil_Amillepora21273 7.76 11.1 86.0% feature · violin
immune_3 30 Amil_Amillepora18069 5.98 10.9 87.7% feature · violin
immune_3 31 Amil_Amillepora00086 5.92 10.8 87.7% feature · violin
immune_3 32 Amil_Amillepora23283 5.68 10.8 87.7% feature · violin
immune_3 33 Amil_Amillepora21032 10.05 10.7 82.5% feature · violin
immune_3 34 Amil_Amillepora32200 2.76 10.6 100.0% feature · violin
immune_3 35 Amil_Amillepora22006 5.17 10.5 89.5% feature · violin
immune_3 36 Amil_Amillepora01150 2.91 10.5 98.2% feature · violin
immune_3 37 Amil_orphan_4810 8.63 10.5 80.7% feature · violin
immune_3 38 Amil_orphan_554 5.23 10.2 84.2% feature · violin
immune_3 39 Amil_Amillepora14669 4.18 10.1 100.0% feature · violin
immune_3 40 Amil_Amillepora27310 5.87 10.1 80.7% feature · violin
immune_3 41 Amil_Amillepora36567 5.61 9.9 78.9% feature · violin
immune_3 42 Amil_orphan_5814 3.98 9.9 86.0% feature · violin
immune_3 43 Amil_Amillepora16483 4.58 9.8 84.2% feature · violin
immune_3 44 Amil_Amillepora25994 10.73 9.8 75.4% feature · violin
immune_3 45 Amil_Amillepora18317 10.21 9.8 75.4% feature · violin
immune_3 46 Amil_Amillepora32295 9.88 9.6 73.7% feature · violin
immune_3 47 Amil_Amillepora32171 8.94 9.6 73.7% feature · violin
immune_3 48 Amil_Amillepora19055 4.97 9.5 78.9% feature · violin
immune_3 49 Amil_Amillepora15099 4.20 9.5 82.5% feature · violin
immune_3 50 Amil_Amillepora03123 5.53 9.4 75.4% feature · violin
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