Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora04039 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
immune_2 1 Amil_Amillepora20363 8.17 19.9 100.0% feature · violin
immune_2 2 Amil_Amillepora20367 13.30 19.8 95.8% feature · violin
immune_2 3 Amil_Amillepora34731 11.66 19.5 94.4% feature · violin
immune_2 4 Amil_Amillepora07051 11.60 19.3 93.7% feature · violin
immune_2 5 Amil_Amillepora23283 6.68 19.0 94.4% feature · violin
immune_2 6 Amil_Amillepora16671 5.06 18.7 95.8% feature · violin
immune_2 7 Amil_Amillepora31040 4.57 18.6 98.6% feature · violin
immune_2 8 Amil_Amillepora13090 8.11 18.3 91.6% feature · violin
immune_2 9 Amil_Amillepora32633 5.94 18.3 95.1% feature · violin
immune_2 10 Amil_Amillepora20678 4.73 18.3 95.1% feature · violin
immune_2 11 Amil_Amillepora21658 5.94 18.1 91.6% feature · violin
immune_2 12 Amil_Amillepora20093 6.01 18.0 94.4% feature · violin
immune_2 13 Amil_Amillepora22006 5.49 17.9 94.4% feature · violin
immune_2 14 Amil_Amillepora04041 12.66 17.8 86.0% feature · violin
immune_2 15 Amil_Amillepora04052 8.89 17.5 85.3% feature · violin
immune_2 16 Amil_Amillepora04054 12.56 17.5 84.6% feature · violin
immune_2 17 Amil_Amillepora26582 7.20 17.4 86.0% feature · violin
immune_2 18 Amil_Amillepora03317 11.56 17.3 83.9% feature · violin
immune_2 19 Amil_orphan_2950 11.96 17.2 83.2% feature · violin
immune_2 20 Amil_Amillepora20112 3.95 16.8 93.7% feature · violin
immune_2 21 Amil_Amillepora18812 12.41 16.7 81.1% feature · violin
immune_2 22 Amil_Amillepora04051 11.10 16.7 81.1% feature · violin
immune_2 23 Amil_orphan_5322 9.41 16.7 81.1% feature · violin
immune_2 24 Amil_Amillepora07717 2.98 16.5 97.2% feature · violin
immune_2 25 Amil_Amillepora21001 5.01 16.4 87.4% feature · violin
immune_2 26 Amil_Amillepora34734 9.51 16.3 79.0% feature · violin
immune_2 27 Amil_Amillepora18782 11.07 16.0 77.6% feature · violin
immune_2 28 Amil_Amillepora27258 2.82 15.8 94.4% feature · violin
immune_2 29 Amil_Amillepora05965 3.76 15.8 95.8% feature · violin
immune_2 30 Amil_Amillepora25076 4.72 15.7 85.3% feature · violin
immune_2 31 Amil_Amillepora24682 4.53 15.6 86.0% feature · violin
immune_2 32 Amil_Amillepora16761 11.59 15.4 74.8% feature · violin
immune_2 33 Amil_Amillepora04039 12.05 15.3 74.1% feature · violin
immune_2 34 Amil_Amillepora28966 8.02 15.1 74.1% feature · violin
immune_2 35 Amil_Amillepora31932 3.97 14.9 82.5% feature · violin
immune_2 36 Amil_Amillepora04044 11.01 14.7 71.3% feature · violin
immune_2 37 Amil_Amillepora35427 9.91 14.7 71.3% feature · violin
immune_2 38 Amil_Amillepora04977 2.99 14.7 91.6% feature · violin
immune_2 39 Amil_orphan_7061 7.05 14.6 74.1% feature · violin
immune_2 40 Amil_Amillepora14915 4.56 14.5 76.9% feature · violin
immune_2 41 Amil_Amillepora34127 2.18 14.4 95.8% feature · violin
immune_2 42 Amil_Amillepora19099 3.53 14.3 83.2% feature · violin
immune_2 43 Amil_Amillepora20066 3.51 14.3 89.5% feature · violin
immune_2 44 Amil_Amillepora18441 6.24 14.1 70.6% feature · violin
immune_2 45 Amil_Amillepora34732 8.92 14.0 67.8% feature · violin
immune_2 46 Amil_Amillepora16034 9.68 13.8 67.1% feature · violin
immune_2 47 Amil_Amillepora07821 9.51 13.8 67.1% feature · violin
immune_2 48 Amil_Amillepora04038 10.82 13.7 66.4% feature · violin
immune_2 49 Amil_Amillepora01150 2.55 13.7 90.2% feature · violin
immune_2 50 Amil_Amillepora08238 3.77 13.6 79.7% feature · violin
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