Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora05992 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
cnidocyte 1 Amil_orphan_9321 10.64 15.9 100.0% feature · violin
cnidocyte 2 Amil_Amillepora12454 10.58 15.9 100.0% feature · violin
cnidocyte 3 Amil_Amillepora12455 10.94 15.9 100.0% feature · violin
cnidocyte 4 Amil_Amillepora12539 11.40 15.9 100.0% feature · violin
cnidocyte 5 Amil_Amillepora08887 10.18 15.7 98.8% feature · violin
cnidocyte 6 Amil_Amillepora12543 10.56 15.5 97.6% feature · violin
cnidocyte 7 Amil_Amillepora08886 10.18 15.3 96.5% feature · violin
cnidocyte 8 Amil_Amillepora05992 6.55 15.3 98.8% feature · violin
cnidocyte 9 Amil_orphan_8570 11.87 14.9 94.1% feature · violin
cnidocyte 10 Amil_Amillepora12453 9.28 14.9 94.1% feature · violin
cnidocyte 11 Amil_Amillepora09627 10.32 14.4 90.6% feature · violin
cnidocyte 12 Amil_Amillepora03704 11.84 14.2 89.4% feature · violin
cnidocyte 13 Amil_orphan_6936 11.37 14.2 89.4% feature · violin
cnidocyte 14 Amil_Amillepora05775 9.52 14.2 89.4% feature · violin
cnidocyte 15 Amil_Amillepora12542 9.37 13.6 85.9% feature · violin
cnidocyte 16 Amil_Amillepora04744 9.73 13.3 83.5% feature · violin
cnidocyte 17 Amil_Amillepora12489 9.83 12.9 82.4% feature · violin
cnidocyte 18 Amil_Amillepora05994 10.53 12.9 81.2% feature · violin
cnidocyte 19 Amil_Amillepora07510 10.82 12.7 80.0% feature · violin
cnidocyte 20 Amil_Amillepora19086 10.47 12.7 80.0% feature · violin
cnidocyte 21 Amil_Amillepora04778 10.10 12.7 80.0% feature · violin
cnidocyte 22 Amil_Amillepora24846 3.06 12.7 97.6% feature · violin
cnidocyte 23 Amil_Amillepora12535 8.34 12.6 82.4% feature · violin
cnidocyte 24 Amil_Amillepora07110 5.87 12.5 82.4% feature · violin
cnidocyte 25 Amil_Amillepora20591 10.10 12.5 78.8% feature · violin
cnidocyte 26 Amil_Amillepora06358 9.10 12.5 78.8% feature · violin
cnidocyte 27 Amil_Amillepora12346 8.72 12.4 78.8% feature · violin
cnidocyte 28 Amil_Amillepora01919 4.00 12.3 90.6% feature · violin
cnidocyte 29 Amil_Amillepora21945 8.63 12.3 77.6% feature · violin
cnidocyte 30 Amil_Amillepora00735 10.34 12.2 76.5% feature · violin
cnidocyte 31 Amil_Amillepora07521 9.66 12.2 76.5% feature · violin
cnidocyte 32 Amil_Amillepora21362 9.67 12.2 76.5% feature · violin
cnidocyte 33 Amil_Amillepora26532 3.14 12.0 98.8% feature · violin
cnidocyte 34 Amil_Amillepora12017 10.50 12.0 75.3% feature · violin
cnidocyte 35 Amil_Amillepora12540 10.32 12.0 75.3% feature · violin
cnidocyte 36 Amil_Amillepora04780 9.73 12.0 75.3% feature · violin
cnidocyte 37 Amil_Amillepora03496 7.64 11.9 75.3% feature · violin
cnidocyte 38 Amil_Amillepora00734 11.27 11.8 74.1% feature · violin
cnidocyte 39 Amil_Amillepora05993 10.76 11.8 74.1% feature · violin
cnidocyte 40 Amil_Amillepora12541 10.29 11.8 74.1% feature · violin
cnidocyte 41 Amil_Amillepora12488 10.98 11.8 74.1% feature · violin
cnidocyte 42 Amil_Amillepora17110 8.28 11.7 74.1% feature · violin
cnidocyte 43 Amil_Amillepora15770 11.32 11.6 72.9% feature · violin
cnidocyte 44 Amil_Amillepora29009 10.15 11.6 72.9% feature · violin
cnidocyte 45 Amil_Amillepora13314 10.27 11.6 72.9% feature · violin
cnidocyte 46 Amil_Amillepora04901 9.03 11.6 72.9% feature · violin
cnidocyte 47 Amil_Amillepora20628 10.53 11.4 71.8% feature · violin
cnidocyte 48 Amil_Amillepora03663 8.27 11.3 71.8% feature · violin
cnidocyte 49 Amil_Amillepora07009 3.81 11.3 85.9% feature · violin
cnidocyte 50 Amil_Amillepora03044 10.55 11.2 70.6% feature · violin
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