Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora09623 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
digestive_filaments 1 Amil_Amillepora09800 11.31 7.5 66.7% feature · violin
digestive_filaments 2 Amil_Amillepora12229 11.00 6.7 59.5% feature · violin
digestive_filaments 3 Amil_orphan_2533 6.56 6.5 59.5% feature · violin
digestive_filaments 4 Amil_orphan_13037 2.87 6.4 92.9% feature · violin
digestive_filaments 5 Amil_Amillepora31032 7.67 6.3 57.1% feature · violin
digestive_filaments 6 Amil_orphan_13016 2.88 6.3 90.5% feature · violin
digestive_filaments 7 Amil_Amillepora14835 5.36 5.8 57.1% feature · violin
digestive_filaments 8 Amil_Amillepora14464 9.05 5.3 47.6% feature · violin
digestive_filaments 9 Amil_Amillepora03336 4.34 4.6 45.2% feature · violin
digestive_filaments 10 Amil_Amillepora09401 10.53 4.5 40.5% feature · violin
digestive_filaments 11 Amil_Amillepora32573 5.95 4.4 40.5% feature · violin
digestive_filaments 12 Amil_Amillepora15330 0.43 4.3 100.0% feature · violin
digestive_filaments 13 Amil_Amillepora23336 0.94 4.2 88.1% feature · violin
digestive_filaments 14 Amil_Amillepora04324 1.71 4.0 61.9% feature · violin
digestive_filaments 15 Amil_Amillepora14669 2.04 3.9 64.3% feature · violin
digestive_filaments 16 Amil_Amillepora15519 5.88 3.6 33.3% feature · violin
digestive_filaments 17 Amil_Amillepora13334 2.78 3.5 40.5% feature · violin
digestive_filaments 18 Amil_Amillepora13332 8.40 3.4 31.0% feature · violin
digestive_filaments 19 Amil_Amillepora27720 7.07 3.4 31.0% feature · violin
digestive_filaments 20 Amil_Amillepora26579 6.02 3.4 31.0% feature · violin
digestive_filaments 21 Amil_Amillepora19250 3.16 3.2 35.7% feature · violin
digestive_filaments 22 Amil_orphan_6700 7.98 3.2 28.6% feature · violin
digestive_filaments 23 Amil_Amillepora29026 7.90 3.2 28.6% feature · violin
digestive_filaments 24 Amil_Amillepora03290 1.00 3.1 64.3% feature · violin
digestive_filaments 25 Amil_Amillepora09084 4.04 3.1 31.0% feature · violin
digestive_filaments 26 Amil_Amillepora24567 2.35 3.0 38.1% feature · violin
digestive_filaments 27 Amil_Amillepora06269 8.10 2.9 26.2% feature · violin
digestive_filaments 28 Amil_Amillepora23305 3.47 2.9 31.0% feature · violin
digestive_filaments 29 Amil_Amillepora34868 6.36 2.9 26.2% feature · violin
digestive_filaments 30 Amil_Amillepora19233 1.63 2.8 47.6% feature · violin
digestive_filaments 31 Amil_orphan_9461 0.25 2.8 90.5% feature · violin
digestive_filaments 32 Amil_Amillepora21932 0.53 2.8 85.7% feature · violin
digestive_filaments 33 Amil_orphan_3124 4.69 2.8 26.2% feature · violin
digestive_filaments 34 Amil_orphan_9457 0.38 2.7 95.2% feature · violin
digestive_filaments 35 Amil_Amillepora12726 4.29 2.7 26.2% feature · violin
digestive_filaments 36 Amil_Amillepora14257 5.68 2.6 23.8% feature · violin
digestive_filaments 37 Amil_Amillepora10715 3.19 2.6 28.6% feature · violin
digestive_filaments 38 Amil_Amillepora30419 0.98 2.5 54.8% feature · violin
digestive_filaments 39 Amil_Amillepora26537 0.87 2.4 52.4% feature · violin
digestive_filaments 40 Amil_Amillepora26953 3.18 2.4 26.2% feature · violin
digestive_filaments 41 Amil_Amillepora12326 9.97 2.4 21.4% feature · violin
digestive_filaments 42 Amil_Amillepora19737 9.31 2.4 21.4% feature · violin
digestive_filaments 43 Amil_Amillepora20995 1.27 2.3 54.8% feature · violin
digestive_filaments 44 Amil_Amillepora07089 0.49 2.3 88.1% feature · violin
digestive_filaments 45 Amil_Amillepora09623 2.67 2.3 26.2% feature · violin
digestive_filaments 46 Amil_Amillepora00666 2.64 2.3 28.6% feature · violin
digestive_filaments 47 Amil_Amillepora02912 5.07 2.3 21.4% feature · violin
digestive_filaments 48 Amil_orphan_6896 0.48 2.3 85.7% feature · violin
digestive_filaments 49 Amil_Amillepora20540 1.66 2.2 35.7% feature · violin
digestive_filaments 50 Amil_Amillepora20872 2.54 2.2 26.2% feature · violin
TOP