Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora11209 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
epidermis 1 Amil_orphan_10006 5.33 85.9 92.3% feature · violin
epidermis 2 Amil_Amillepora19233 4.88 85.4 93.3% feature · violin
epidermis 3 Amil_Amillepora01369 5.08 84.0 89.5% feature · violin
epidermis 4 Amil_Amillepora22183 5.16 82.9 95.9% feature · violin
epidermis 5 Amil_Amillepora15760 6.87 82.5 88.5% feature · violin
epidermis 6 Amil_Amillepora04870 6.01 77.1 84.3% feature · violin
epidermis 7 Amil_orphan_4743 5.46 76.1 81.0% feature · violin
epidermis 8 Amil_Amillepora14669 4.29 75.9 94.5% feature · violin
epidermis 9 Amil_Amillepora22153 2.58 75.3 97.0% feature · violin
epidermis 10 Amil_orphan_4101 5.48 73.3 75.5% feature · violin
epidermis 11 Amil_Amillepora04869 5.61 73.0 76.7% feature · violin
epidermis 12 Amil_Amillepora34856 5.60 70.4 74.9% feature · violin
epidermis 13 Amil_Amillepora24567 5.89 69.9 71.6% feature · violin
epidermis 14 Amil_Amillepora05838 5.27 69.6 72.9% feature · violin
epidermis 15 Amil_orphan_13412 2.80 66.2 91.4% feature · violin
epidermis 16 Amil_Amillepora14676 2.79 65.9 91.9% feature · violin
epidermis 17 Amil_orphan_4737 4.36 65.4 72.8% feature · violin
epidermis 18 Amil_Amillepora04922 3.38 65.1 92.1% feature · violin
epidermis 19 Amil_Amillepora31040 2.90 64.2 96.9% feature · violin
epidermis 20 Amil_Amillepora06637 4.58 63.3 86.4% feature · violin
epidermis 21 Amil_Amillepora21015 5.33 61.7 64.4% feature · violin
epidermis 22 Amil_Amillepora04504 3.56 59.9 73.4% feature · violin
epidermis 23 Amil_orphan_1482 2.48 57.4 85.4% feature · violin
epidermis 24 Amil_Amillepora08356 5.11 56.7 65.0% feature · violin
epidermis 25 Amil_Amillepora24565 2.41 56.2 94.8% feature · violin
epidermis 26 Amil_orphan_12782 4.81 54.8 61.2% feature · violin
epidermis 27 Amil_Amillepora32265 2.77 54.6 74.7% feature · violin
epidermis 28 Amil_Amillepora00991 5.11 54.6 56.7% feature · violin
epidermis 29 Amil_Amillepora08357 4.86 54.2 59.7% feature · violin
epidermis 30 Amil_Amillepora22182 4.76 53.3 56.9% feature · violin
epidermis 31 Amil_Amillepora11218 2.25 52.8 85.1% feature · violin
epidermis 32 Amil_Amillepora01150 2.09 52.8 84.8% feature · violin
epidermis 33 Amil_Amillepora11209 5.50 52.6 56.4% feature · violin
epidermis 34 Amil_Amillepora13082 3.69 52.4 62.1% feature · violin
epidermis 35 Amil_Amillepora22512 2.99 50.7 69.9% feature · violin
epidermis 36 Amil_Amillepora20332 4.59 49.5 52.3% feature · violin
epidermis 37 Amil_Amillepora04871 4.32 48.4 53.0% feature · violin
epidermis 38 Amil_Amillepora00990 5.63 48.1 48.9% feature · violin
epidermis 39 Amil_Amillepora04681 2.71 48.0 63.4% feature · violin
epidermis 40 Amil_Amillepora15099 3.33 47.9 57.0% feature · violin
epidermis 41 Amil_Amillepora23355 2.85 47.5 60.8% feature · violin
epidermis 42 Amil_Amillepora17975 1.43 47.4 92.2% feature · violin
epidermis 43 Amil_Amillepora26189 3.47 46.7 53.7% feature · violin
epidermis 44 Amil_Amillepora19382 2.41 46.3 71.1% feature · violin
epidermis 45 Amil_Amillepora02023 3.38 46.0 53.4% feature · violin
epidermis 46 Amil_Amillepora28569 2.62 45.8 66.1% feature · violin
epidermis 47 Amil_Amillepora00755 1.67 45.7 87.1% feature · violin
epidermis 48 Amil_Amillepora00083 5.06 45.2 46.9% feature · violin
epidermis 49 Amil_Amillepora09936 3.85 44.8 49.9% feature · violin
epidermis 50 Amil_orphan_1412 4.45 44.4 46.8% feature · violin
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