Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora14092 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_4 1 Amil_Amillepora14092 8.05 11.8 76.8% feature · violin
gland_4 2 Amil_Amillepora18267 6.23 10.3 69.5% feature · violin
gland_4 3 Amil_orphan_4078 9.75 9.0 58.5% feature · violin
gland_4 4 Amil_Amillepora01754 4.11 8.6 63.4% feature · violin
gland_4 5 Amil_orphan_7799 9.81 8.4 53.7% feature · violin
gland_4 6 Amil_orphan_871 4.16 8.2 59.8% feature · violin
gland_4 7 Amil_orphan_2533 5.96 8.1 53.7% feature · violin
gland_4 8 Amil_orphan_5503 7.95 7.8 50.0% feature · violin
gland_4 9 Amil_Amillepora19739 9.57 7.4 47.6% feature · violin
gland_4 10 Amil_Amillepora14298 2.14 6.4 65.9% feature · violin
gland_4 11 Amil_orphan_4699 8.21 6.3 40.2% feature · violin
gland_4 12 Amil_Amillepora03536 10.44 6.1 39.0% feature · violin
gland_4 13 Amil_orphan_1483 4.25 5.7 39.0% feature · violin
gland_4 14 Amil_Amillepora33567 7.21 5.6 36.6% feature · violin
gland_4 15 Amil_Amillepora18322 10.78 5.5 35.4% feature · violin
gland_4 16 Amil_Amillepora35436 10.22 5.0 31.7% feature · violin
gland_4 17 Amil_Amillepora14296 3.90 4.9 35.4% feature · violin
gland_4 18 Amil_Amillepora09619 10.86 4.8 30.5% feature · violin
gland_4 19 Amil_Amillepora30874 9.61 4.8 30.5% feature · violin
gland_4 20 Amil_Amillepora14546 6.89 4.7 30.5% feature · violin
gland_4 21 Amil_Amillepora23305 3.31 4.6 35.4% feature · violin
gland_4 22 Amil_Amillepora30899 9.49 4.4 28.0% feature · violin
gland_4 23 Amil_Amillepora06229 4.41 4.3 30.5% feature · violin
gland_4 24 Amil_Amillepora22643 1.18 4.3 70.7% feature · violin
gland_4 25 Amil_Amillepora10252 3.35 4.3 31.7% feature · violin
gland_4 26 Amil_Amillepora14471 4.17 4.2 29.3% feature · violin
gland_4 27 Amil_Amillepora18269 3.09 4.2 30.5% feature · violin
gland_4 28 Amil_Amillepora30873 6.66 4.1 26.8% feature · violin
gland_4 29 Amil_orphan_7319 6.52 4.1 26.8% feature · violin
gland_4 30 Amil_orphan_565 6.67 4.0 28.0% feature · violin
gland_4 31 Amil_Amillepora17007 2.67 4.0 34.1% feature · violin
gland_4 32 Amil_Amillepora19061 3.31 4.0 30.5% feature · violin
gland_4 33 Amil_Amillepora03085 11.41 4.0 25.6% feature · violin
gland_4 34 Amil_Amillepora05817 10.37 4.0 25.6% feature · violin
gland_4 35 Amil_Amillepora03084 10.09 4.0 25.6% feature · violin
gland_4 36 Amil_orphan_4099 7.86 4.0 25.6% feature · violin
gland_4 37 Amil_Amillepora14540 8.99 4.0 25.6% feature · violin
gland_4 38 Amil_Amillepora19778 8.90 4.0 25.6% feature · violin
gland_4 39 Amil_Amillepora26131 7.58 4.0 25.6% feature · violin
gland_4 40 Amil_Amillepora07597 1.84 3.9 39.0% feature · violin
gland_4 41 Amil_Amillepora01317 11.42 3.8 24.4% feature · violin
gland_4 42 Amil_Amillepora05815 9.23 3.8 24.4% feature · violin
gland_4 43 Amil_orphan_7802 7.10 3.8 24.4% feature · violin
gland_4 44 Amil_Amillepora23438 8.39 3.8 24.4% feature · violin
gland_4 45 Amil_Amillepora24434 3.29 3.8 28.0% feature · violin
gland_4 46 Amil_Amillepora10600 3.75 3.8 26.8% feature · violin
gland_4 47 Amil_orphan_213 5.69 3.7 24.4% feature · violin
gland_4 48 Amil_Amillepora03934 3.02 3.7 28.0% feature · violin
gland_4 49 Amil_Amillepora03917 10.27 3.6 23.2% feature · violin
gland_4 50 Amil_orphan_7464 9.09 3.6 23.2% feature · violin
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