Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis_15572 epidermis4171 gastrodermis_23249 gastrodermis_alga_hosting2466 gastrodermis_like1530 calicoblast1417 neuron_Isl_1931 gastrodermis_muscle827 neuron_Pou4669 immune_1531 gastrodermis_mitotic487 neuron_Isl_2472 neurosecretory_progenitors435 epidermis_like_2432 epidermis_like_1411 germline_oocytes366 gland_2310 neuron_Pou4_Otp250 immune_2143 cnidocyte85 gland_482 gland_363 gland_1_Xbp61 immune_357 gland_553 gland_652 digestive_filaments42

Showing the cell type that Amil_Amillepora19005 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
neuron_Isl_1 1 Amil_Amillepora03878 6.47 38.8 78.2% feature · violin
neuron_Isl_1 2 Amil_orphan_6935 5.59 30.5 65.0% feature · violin
neuron_Isl_1 3 Amil_Amillepora18259 5.80 28.4 57.3% feature · violin
neuron_Isl_1 4 Amil_Amillepora04670 4.76 27.2 57.5% feature · violin
neuron_Isl_1 5 Amil_Amillepora06710 5.68 26.2 52.7% feature · violin
neuron_Isl_1 6 Amil_Amillepora10252 5.43 25.8 52.1% feature · violin
neuron_Isl_1 7 Amil_Amillepora07009 3.32 24.3 57.4% feature · violin
neuron_Isl_1 8 Amil_Amillepora14296 5.10 21.8 44.4% feature · violin
neuron_Isl_1 9 Amil_Amillepora13179 4.91 20.1 41.0% feature · violin
neuron_Isl_1 10 Amil_orphan_8270 2.40 19.9 55.6% feature · violin
neuron_Isl_1 11 Amil_Amillepora19007 2.50 19.4 52.4% feature · violin
neuron_Isl_1 12 Amil_Amillepora08605 3.72 18.9 42.1% feature · violin
neuron_Isl_1 13 Amil_orphan_7055 3.99 18.8 40.7% feature · violin
neuron_Isl_1 14 Amil_Amillepora32633 2.89 18.3 45.6% feature · violin
neuron_Isl_1 15 Amil_Amillepora03877 5.12 18.0 36.6% feature · violin
neuron_Isl_1 16 Amil_Amillepora03934 4.31 17.8 37.3% feature · violin
neuron_Isl_1 17 Amil_Amillepora19006 4.93 17.1 34.7% feature · violin
neuron_Isl_1 18 Amil_Amillepora22670 2.68 15.0 37.7% feature · violin
neuron_Isl_1 19 Amil_Amillepora07597 2.38 14.8 40.5% feature · violin
neuron_Isl_1 20 Amil_Amillepora17016 5.18 14.4 29.0% feature · violin
neuron_Isl_1 21 Amil_Amillepora09020 5.93 14.1 27.9% feature · violin
neuron_Isl_1 22 Amil_Amillepora19005 4.38 13.8 28.6% feature · violin
neuron_Isl_1 23 Amil_Amillepora14040 4.16 13.8 28.9% feature · violin
neuron_Isl_1 24 Amil_Amillepora05074 4.26 13.7 28.7% feature · violin
neuron_Isl_1 25 Amil_Amillepora13049 6.46 13.5 27.1% feature · violin
neuron_Isl_1 26 Amil_Amillepora20093 2.96 13.4 32.4% feature · violin
neuron_Isl_1 27 Amil_Amillepora16116 3.82 13.4 29.1% feature · violin
neuron_Isl_1 28 Amil_Amillepora00038 3.76 13.2 28.5% feature · violin
neuron_Isl_1 29 Amil_Amillepora16396 3.29 13.0 29.6% feature · violin
neuron_Isl_1 30 Amil_Amillepora10740 3.56 13.0 29.0% feature · violin
neuron_Isl_1 31 Amil_Amillepora11597 8.49 12.7 24.6% feature · violin
neuron_Isl_1 32 Amil_Amillepora22022 5.33 12.4 27.0% feature · violin
neuron_Isl_1 33 Amil_Amillepora24434 3.51 12.0 26.3% feature · violin
neuron_Isl_1 34 Amil_Amillepora05797 3.93 12.0 25.5% feature · violin
neuron_Isl_1 35 Amil_Amillepora01235 2.32 11.9 32.4% feature · violin
neuron_Isl_1 36 Amil_Amillepora03552 4.70 11.6 23.6% feature · violin
neuron_Isl_1 37 Amil_Amillepora19227 3.24 11.4 26.0% feature · violin
neuron_Isl_1 38 Amil_Amillepora12442 1.61 10.3 36.5% feature · violin
neuron_Isl_1 39 Amil_orphan_3178 4.33 10.0 20.6% feature · violin
neuron_Isl_1 40 Amil_Amillepora07361 3.40 9.9 22.1% feature · violin
neuron_Isl_1 41 Amil_Amillepora15426 3.41 9.9 21.9% feature · violin
neuron_Isl_1 42 Amil_Amillepora08579 6.76 9.9 19.3% feature · violin
neuron_Isl_1 43 Amil_Amillepora27267 5.11 9.7 19.9% feature · violin
neuron_Isl_1 44 Amil_Amillepora15768 4.34 9.5 19.7% feature · violin
neuron_Isl_1 45 Amil_Amillepora26981 3.71 9.4 27.7% feature · violin
neuron_Isl_1 46 Amil_Amillepora01095 4.31 9.2 18.9% feature · violin
neuron_Isl_1 47 Amil_Amillepora08691 3.96 9.0 18.9% feature · violin
neuron_Isl_1 48 Amil_Amillepora02561 2.31 9.0 24.4% feature · violin
neuron_Isl_1 49 Amil_Amillepora26110 1.77 9.0 29.2% feature · violin
neuron_Isl_1 50 Amil_Amillepora21986 2.48 9.0 23.0% feature · violin
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