Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Amil_Amillepora26258 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_2 1 XP_044170253.1 (Amil_Amillepora03652) 12.09 30.0 99.0% feature · violin
gland_2 2 XP_044182280.1 (Amil_Amillepora18267) 11.48 30.0 99.0% feature · violin
gland_2 3 Amil_orphan_1483 not mapped 12.38 29.7 98.1% feature · violin
gland_2 4 XP_044182281.1 (Amil_Amillepora18269) 11.86 29.7 98.1% feature · violin
gland_2 5 XP_029203632.2 (Amil_Amillepora34399) 12.61 28.2 93.5% feature · violin
gland_2 6 XP_044168738.1 (Amil_Amillepora29750) 11.00 28.0 92.6% feature · violin
gland_2 7 XP_029185172.2 (Amil_Amillepora13143) 8.09 27.9 92.6% feature · violin
gland_2 8 XP_044166635.1 (Amil_Amillepora30896) 12.37 27.7 91.6% feature · violin
gland_2 9 XP_029191936.1 (Amil_Amillepora22643) 3.48 26.8 96.8% feature · violin
gland_2 10 XP_044183467.1 (Amil_Amillepora26258) 11.60 26.4 87.1% feature · violin
gland_2 11 XP_029182764.2 (Amil_Amillepora20941) 9.49 26.1 86.5% feature · violin
gland_2 12 Amil_orphan_3909 not mapped 9.56 25.4 84.2% feature · violin
gland_2 13 XP_029209799.1 (Amil_Amillepora33350) 6.92 25.4 85.5% feature · violin
gland_2 14 XP_029206798.2 (Amil_Amillepora29738) 10.56 24.8 81.9% feature · violin
gland_2 15 XP_044162761.1 (Amil_Amillepora02733) 8.73 24.5 81.3% feature · violin
gland_2 16 XP_029194827.2 (Amil_Amillepora01919) 3.61 23.6 91.0% feature · violin
gland_2 17 Amil_Amillepora06816 not mapped 8.97 22.9 76.5% feature · violin
gland_2 18 XP_029187658.1 (Amil_Amillepora09682) 6.30 22.7 77.7% feature · violin
gland_2 19 XP_029193623.1 (Amil_Amillepora19983) 10.32 22.2 73.5% feature · violin
gland_2 20 XP_029199095.1 (Amil_Amillepora10720) 4.95 21.9 77.4% feature · violin
gland_2 21 Amil_orphan_9651 not mapped 9.14 21.7 71.9% feature · violin
gland_2 22 Amil_Amillepora22105 not mapped 5.67 21.5 74.2% feature · violin
gland_2 23 XP_029212047.1 (Amil_Amillepora04833) 9.78 21.4 70.6% feature · violin
gland_2 24 Amil_orphan_6118 not mapped 7.39 21.2 71.0% feature · violin
gland_2 25 XP_029195760.2 (Amil_Amillepora20366) 4.84 20.9 74.8% feature · violin
gland_2 26 XP_044164402.1 (Amil_Amillepora25131) 3.26 20.7 86.1% feature · violin
gland_2 27 XP_029214583.1 (Amil_Amillepora26532) 2.33 20.4 92.6% feature · violin
gland_2 28 XP_029202761.1 (Amil_Amillepora13722) 3.60 20.3 78.7% feature · violin
gland_2 29 XP_044181075.1 (Amil_Amillepora21629) 11.66 20.2 66.8% feature · violin
gland_2 30 Amil_Amillepora12339 not mapped 4.90 19.8 71.0% feature · violin
gland_2 31 Amil_Amillepora37178 not mapped 7.35 19.7 65.8% feature · violin
gland_2 32 XP_029205313.2 (Amil_Amillepora09609) 6.04 19.5 66.5% feature · violin
gland_2 33 Amil_Amillepora04217 not mapped 10.49 19.4 64.2% feature · violin
gland_2 34 XP_044170959.1 (Amil_Amillepora03764) 9.05 19.0 62.9% feature · violin
gland_2 35 XP_029191042.2 (Amil_Amillepora08820) 4.36 19.0 68.7% feature · violin
gland_2 36 XP_029213377.1 (Amil_Amillepora06105) 3.26 19.0 78.4% feature · violin
gland_2 37 XP_044166778.1 (Amil_Amillepora03867) 11.17 18.8 61.9% feature · violin
gland_2 38 Amil_orphan_7498 not mapped 3.03 18.3 77.7% feature · violin
gland_2 39 XP_029192025.1 (Amil_Amillepora05992) 3.44 18.1 72.6% feature · violin
gland_2 40 XP_029199593.2 (Amil_Amillepora04570) 4.36 18.1 65.8% feature · violin
gland_2 41 Amil_orphan_10006 not mapped 4.25 17.9 71.6% feature · violin
gland_2 42 XP_029200494.1 (Amil_Amillepora08634) 2.38 17.8 86.8% feature · violin
gland_2 43 Amil_Amillepora19980 not mapped 5.56 17.7 61.3% feature · violin
gland_2 44 Amil_orphan_7055 not mapped 4.36 17.6 64.8% feature · violin
gland_2 45 Amil_Amillepora04220 not mapped 8.75 17.4 58.1% feature · violin
gland_2 46 Amil_Amillepora23490 not mapped 11.09 17.4 57.4% feature · violin
gland_2 47 XP_044175105.1 (Amil_Amillepora10600) 5.48 17.4 60.0% feature · violin
gland_2 48 Amil_orphan_11434 not mapped 10.80 17.3 57.1% feature · violin
gland_2 49 Amil_orphan_3081 not mapped 5.84 17.1 58.1% feature · violin
gland_2 50 XP_044177942.1 (Amil_Amillepora19361) 2.13 17.1 89.7% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Acropora millepora, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 17 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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