Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Amil_Amillepora30873 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_4 1 XP_029203024.2 (Amil_Amillepora14092) 8.05 11.8 76.8% feature · violin
gland_4 2 XP_044182280.1 (Amil_Amillepora18267) 6.23 10.3 69.5% feature · violin
gland_4 3 Amil_orphan_4078 not mapped 9.75 9.0 58.5% feature · violin
gland_4 4 Amil_Amillepora01754 not mapped 4.11 8.6 63.4% feature · violin
gland_4 5 Amil_orphan_7799 not mapped 9.81 8.4 53.7% feature · violin
gland_4 6 Amil_orphan_871 not mapped 4.16 8.2 59.8% feature · violin
gland_4 7 Amil_orphan_2533 not mapped 5.96 8.1 53.7% feature · violin
gland_4 8 Amil_orphan_5503 not mapped 7.95 7.8 50.0% feature · violin
gland_4 9 XP_044178450.1 (Amil_Amillepora19739) 9.57 7.4 47.6% feature · violin
gland_4 10 XP_029189738.2 (Amil_Amillepora14298) 2.14 6.4 65.9% feature · violin
gland_4 11 Amil_orphan_4699 not mapped 8.21 6.3 40.2% feature · violin
gland_4 12 XP_029188544.2 (Amil_Amillepora03536) 10.44 6.1 39.0% feature · violin
gland_4 13 Amil_orphan_1483 not mapped 4.25 5.7 39.0% feature · violin
gland_4 14 XP_029183113.1 (Amil_Amillepora33567) 7.21 5.6 36.6% feature · violin
gland_4 15 XP_029204131.2 (Amil_Amillepora18322) 10.78 5.5 35.4% feature · violin
gland_4 16 XP_029182930.2 (Amil_Amillepora35436) 10.22 5.0 31.7% feature · violin
gland_4 17 Amil_Amillepora14296 not mapped 3.90 4.9 35.4% feature · violin
gland_4 18 XP_029198685.2 (Amil_Amillepora09619) 10.86 4.8 30.5% feature · violin
gland_4 19 XP_044166650.1 (Amil_Amillepora30874) 9.61 4.8 30.5% feature · violin
gland_4 20 XP_029191842.2 (Amil_Amillepora14546) 6.89 4.7 30.5% feature · violin
gland_4 21 XP_029194523.2 (Amil_Amillepora23305) 3.31 4.6 35.4% feature · violin
gland_4 22 XP_044166650.1 (Amil_Amillepora30899) 9.49 4.4 28.0% feature · violin
gland_4 23 XP_029197086.2 (Amil_Amillepora06229) 4.41 4.3 30.5% feature · violin
gland_4 24 XP_029191936.1 (Amil_Amillepora22643) 1.18 4.3 70.7% feature · violin
gland_4 25 XP_029185107.2 (Amil_Amillepora10252) 3.35 4.3 31.7% feature · violin
gland_4 26 XP_029192260.2 (Amil_Amillepora14471) 4.17 4.2 29.3% feature · violin
gland_4 27 XP_044182281.1 (Amil_Amillepora18269) 3.09 4.2 30.5% feature · violin
gland_4 28 XP_044166645.1 (Amil_Amillepora30873) 6.66 4.1 26.8% feature · violin
gland_4 29 Amil_orphan_7319 not mapped 6.52 4.1 26.8% feature · violin
gland_4 30 Amil_orphan_565 not mapped 6.67 4.0 28.0% feature · violin
gland_4 31 XP_029185880.2 (Amil_Amillepora17007) 2.67 4.0 34.1% feature · violin
gland_4 32 XP_029194046.2 (Amil_Amillepora19061) 3.31 4.0 30.5% feature · violin
gland_4 33 Amil_Amillepora03085 not mapped 11.41 4.0 25.6% feature · violin
gland_4 34 Amil_Amillepora05817 not mapped 10.37 4.0 25.6% feature · violin
gland_4 35 Amil_Amillepora03084 not mapped 10.09 4.0 25.6% feature · violin
gland_4 36 Amil_orphan_4099 not mapped 7.86 4.0 25.6% feature · violin
gland_4 37 XP_044184065.1 (Amil_Amillepora14540) 8.99 4.0 25.6% feature · violin
gland_4 38 XP_044178474.1 (Amil_Amillepora19778) 8.90 4.0 25.6% feature · violin
gland_4 39 Amil_Amillepora26131 not mapped 7.58 4.0 25.6% feature · violin
gland_4 40 XP_029208331.2 (Amil_Amillepora07597) 1.84 3.9 39.0% feature · violin
gland_4 41 XP_029200105.2 (Amil_Amillepora01317) 11.42 3.8 24.4% feature · violin
gland_4 42 Amil_Amillepora05815 not mapped 9.23 3.8 24.4% feature · violin
gland_4 43 Amil_orphan_7802 not mapped 7.10 3.8 24.4% feature · violin
gland_4 44 XP_029191496.2 (Amil_Amillepora23438) 8.39 3.8 24.4% feature · violin
gland_4 45 XP_029204784.2 (Amil_Amillepora24434) 3.29 3.8 28.0% feature · violin
gland_4 46 XP_044175105.1 (Amil_Amillepora10600) 3.75 3.8 26.8% feature · violin
gland_4 47 Amil_orphan_213 not mapped 5.69 3.7 24.4% feature · violin
gland_4 48 XP_029203670.1 (Amil_Amillepora03934) 3.02 3.7 28.0% feature · violin
gland_4 49 Amil_Amillepora03917 not mapped 10.27 3.6 23.2% feature · violin
gland_4 50 Amil_orphan_7464 not mapped 9.09 3.6 23.2% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Acropora millepora, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 21 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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