Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE11079 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 11 1 NVE7724 4.82 67.1 80.4% feature · violin
Cluster 11 2 NVE6010 3.22 62.1 87.2% feature · violin
Cluster 11 3 NVE23145 2.68 55.7 94.5% feature · violin
Cluster 11 4 NVE13160 2.50 53.8 85.2% feature · violin
Cluster 11 5 NVE11079 2.77 52.3 68.8% feature · violin
Cluster 11 6 NVE25792 2.49 52.1 80.4% feature · violin
Cluster 11 7 NVE21409 2.18 50.8 86.4% feature · violin
Cluster 11 8 NVE18855 3.30 50.0 58.8% feature · violin
Cluster 11 9 NVE21090 2.01 49.2 90.2% feature · violin
Cluster 11 10 NVE17843 3.33 48.7 63.5% feature · violin
Cluster 11 11 NVE8266 3.03 47.0 64.7% feature · violin
Cluster 11 12 NVE10968 2.18 45.9 76.2% feature · violin
Cluster 11 13 NVE20852 2.61 44.7 63.9% feature · violin
Cluster 11 14 NVE18272 1.85 44.4 85.6% feature · violin
Cluster 11 15 NVE15194 1.73 43.1 97.9% feature · violin
Cluster 11 16 NVE69 0.95 42.6 98.0% feature · violin
Cluster 11 17 NVE14037 3.00 41.8 50.8% feature · violin
Cluster 11 18 NVE17845 3.19 41.8 51.0% feature · violin
Cluster 11 19 NVE4448 2.50 41.6 64.6% feature · violin
Cluster 11 20 NVE1907 1.58 41.2 91.4% feature · violin
Cluster 11 21 NVE20305 1.78 40.5 84.4% feature · violin
Cluster 11 22 NVE3351 0.97 40.4 97.5% feature · violin
Cluster 11 23 NVE25536 1.71 40.0 79.9% feature · violin
Cluster 11 24 NVE25082 1.53 39.4 79.4% feature · violin
Cluster 11 25 NVE3068 1.77 39.1 68.7% feature · violin
Cluster 11 26 NVE17842 2.84 38.9 53.5% feature · violin
Cluster 11 27 NVE13022 2.24 38.8 56.0% feature · violin
Cluster 11 28 NVE13456 1.64 38.8 77.8% feature · violin
Cluster 11 29 NVE13447 0.77 38.7 98.7% feature · violin
Cluster 11 30 NVE5412 2.81 38.6 49.2% feature · violin
Cluster 11 31 NVE16297 1.78 38.2 79.8% feature · violin
Cluster 11 32 NVE5546 2.93 38.1 45.9% feature · violin
Cluster 11 33 NVE12172 1.64 37.4 78.0% feature · violin
Cluster 11 34 NVE20813 2.30 37.4 54.2% feature · violin
Cluster 11 35 NVE15793 1.94 37.2 60.1% feature · violin
Cluster 11 36 NVE5299 3.02 36.8 43.0% feature · violin
Cluster 11 37 NVE22473 2.60 36.7 51.8% feature · violin
Cluster 11 38 NVE12051 0.47 36.2 99.8% feature · violin
Cluster 11 39 NVE20682 0.90 36.2 95.8% feature · violin
Cluster 11 40 NVE1165 3.32 36.1 40.6% feature · violin
Cluster 11 41 NVE22411 1.38 35.8 93.5% feature · violin
Cluster 11 42 NVE11578 1.04 35.4 92.8% feature · violin
Cluster 11 43 NVE45 0.58 35.4 99.0% feature · violin
Cluster 11 44 NVE14926 0.67 35.3 98.9% feature · violin
Cluster 11 45 NVE24738 1.72 35.3 81.6% feature · violin
Cluster 11 46 NVE25369 0.70 35.1 98.8% feature · violin
Cluster 11 47 NVE22400 1.59 34.9 64.6% feature · violin
Cluster 11 48 NVE6308 2.58 34.7 43.6% feature · violin
Cluster 11 49 NVE2942 0.69 34.6 98.3% feature · violin
Cluster 11 50 NVE3157 2.10 34.5 50.3% feature · violin
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