Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE11310 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 22 1 NVE25570 2.05 45.3 99.5% feature · violin
Cluster 22 2 NVE4959 8.55 43.7 78.1% feature · violin
Cluster 22 3 NVE7082 8.47 43.3 77.5% feature · violin
Cluster 22 4 NVE1494 9.87 43.2 76.6% feature · violin
Cluster 22 5 NVE10898 7.43 40.4 73.0% feature · violin
Cluster 22 6 NVE11820 6.61 40.4 73.5% feature · violin
Cluster 22 7 NVE47 8.26 40.3 72.2% feature · violin
Cluster 22 8 NVE11748 7.67 37.9 68.1% feature · violin
Cluster 22 9 NVE3357 5.86 36.5 67.6% feature · violin
Cluster 22 10 NVE24914 3.20 36.4 78.6% feature · violin
Cluster 22 11 NVE265 9.37 36.3 64.5% feature · violin
Cluster 22 12 NVE1605 9.36 34.8 61.8% feature · violin
Cluster 22 13 NVE23019 4.04 32.4 66.5% feature · violin
Cluster 22 14 NVE2514 6.64 32.3 58.5% feature · violin
Cluster 22 15 NVE19483 7.21 32.2 57.8% feature · violin
Cluster 22 16 NVE3093 4.32 32.0 62.9% feature · violin
Cluster 22 17 NVE12063 5.74 31.9 58.6% feature · violin
Cluster 22 18 NVE20107 4.75 30.9 59.2% feature · violin
Cluster 22 19 NVE14303 2.89 30.6 70.1% feature · violin
Cluster 22 20 NVE24215 6.13 29.5 53.8% feature · violin
Cluster 22 21 NVE25571 2.82 29.4 72.1% feature · violin
Cluster 22 22 NVE19 3.81 28.9 60.1% feature · violin
Cluster 22 23 NVE13244 4.48 28.7 55.5% feature · violin
Cluster 22 24 NVE5442 4.67 28.4 55.3% feature · violin
Cluster 22 25 NVE21804 5.67 28.4 52.2% feature · violin
Cluster 22 26 NVE23271 2.96 28.4 65.6% feature · violin
Cluster 22 27 NVE5133 8.96 28.3 50.2% feature · violin
Cluster 22 28 NVE426 8.06 28.2 50.3% feature · violin
Cluster 22 29 NVE8763 3.90 27.8 56.1% feature · violin
Cluster 22 30 NVE12981 4.15 27.4 54.2% feature · violin
Cluster 22 31 NVE16072 8.38 27.4 48.8% feature · violin
Cluster 22 32 NVE14741 3.57 27.2 57.3% feature · violin
Cluster 22 33 NVE18817 6.78 26.9 48.3% feature · violin
Cluster 22 34 NVE5471 4.52 26.5 51.1% feature · violin
Cluster 22 35 NVE8270 1.78 26.4 89.1% feature · violin
Cluster 22 36 NVE6868 4.71 26.4 50.4% feature · violin
Cluster 22 37 NVE22513 8.79 26.3 46.7% feature · violin
Cluster 22 38 NVE10791 2.52 26.1 67.3% feature · violin
Cluster 22 39 NVE14933 5.18 26.0 49.0% feature · violin
Cluster 22 40 NVE8088 7.32 25.9 46.3% feature · violin
Cluster 22 41 NVE22714 9.29 25.9 45.9% feature · violin
Cluster 22 42 NVE11310 10.28 25.8 45.6% feature · violin
Cluster 22 43 NVE21040 7.12 25.7 46.0% feature · violin
Cluster 22 44 NVE1495 8.36 25.6 45.6% feature · violin
Cluster 22 45 NVE1277 7.70 25.6 45.8% feature · violin
Cluster 22 46 NVE17084 2.22 25.6 81.5% feature · violin
Cluster 22 47 NVE15276 1.50 25.2 81.4% feature · violin
Cluster 22 48 NVE16074 6.14 25.0 45.6% feature · violin
Cluster 22 49 NVE7447 6.28 24.9 45.3% feature · violin
Cluster 22 50 NVE23852 8.12 24.8 44.2% feature · violin
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