Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE12848 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 24 1 NVE4451 8.84 28.1 79.1% feature · violin
Cluster 24 2 NVE12326 7.84 23.9 67.6% feature · violin
Cluster 24 3 NVE15760 7.87 22.7 65.1% feature · violin
Cluster 24 4 NVE20094 8.91 21.3 60.0% feature · violin
Cluster 24 5 NVE1907 2.18 19.9 95.2% feature · violin
Cluster 24 6 NVE19066 8.82 19.8 55.4% feature · violin
Cluster 24 7 NVE23143 1.26 19.3 98.4% feature · violin
Cluster 24 8 NVE9066 6.10 18.6 53.3% feature · violin
Cluster 24 9 NVE6677 3.44 18.6 64.6% feature · violin
Cluster 24 10 NVE20565 3.43 17.6 59.5% feature · violin
Cluster 24 11 NVE16591 5.51 17.4 51.7% feature · violin
Cluster 24 12 NVE20630 3.26 17.4 62.1% feature · violin
Cluster 24 13 NVE1143 5.94 16.7 49.7% feature · violin
Cluster 24 14 NVE3463 2.21 16.2 69.2% feature · violin
Cluster 24 15 NVE12036 6.90 15.9 45.1% feature · violin
Cluster 24 16 NVE3867 8.50 15.8 44.4% feature · violin
Cluster 24 17 NVE5662 2.73 15.2 56.8% feature · violin
Cluster 24 18 NVE15969 2.13 15.0 71.3% feature · violin
Cluster 24 19 NVE10853 3.19 15.0 52.0% feature · violin
Cluster 24 20 NVE2234 4.47 14.8 44.6% feature · violin
Cluster 24 21 NVE17615 7.18 14.7 41.4% feature · violin
Cluster 24 22 NVE14802 6.07 14.2 40.7% feature · violin
Cluster 24 23 NVE25859 6.04 14.2 40.5% feature · violin
Cluster 24 24 NVE13685 4.29 13.9 45.5% feature · violin
Cluster 24 25 NVE23972 2.47 13.8 55.4% feature · violin
Cluster 24 26 NVE1555 7.13 13.7 40.0% feature · violin
Cluster 24 27 NVE23271 2.25 13.5 56.8% feature · violin
Cluster 24 28 NVE9787 2.10 13.4 96.8% feature · violin
Cluster 24 29 NVE19156 5.97 13.4 38.6% feature · violin
Cluster 24 30 NVE12842 2.08 13.3 82.8% feature · violin
Cluster 24 31 NVE23145 1.86 12.9 89.2% feature · violin
Cluster 24 32 NVE3143 1.04 12.9 89.4% feature · violin
Cluster 24 33 NVE5222 4.77 12.6 37.7% feature · violin
Cluster 24 34 NVE7526 7.11 12.3 35.2% feature · violin
Cluster 24 35 NVE24697 1.92 12.0 56.3% feature · violin
Cluster 24 36 NVE6890 1.83 12.0 69.7% feature · violin
Cluster 24 37 NVE15435 2.24 11.9 62.5% feature · violin
Cluster 24 38 NVE13346 0.76 11.7 97.7% feature · violin
Cluster 24 39 NVE2618 1.15 11.7 95.6% feature · violin
Cluster 24 40 NVE10019 1.29 11.6 78.9% feature · violin
Cluster 24 41 NVE13315 1.02 11.5 80.7% feature · violin
Cluster 24 42 NVE3918 1.87 11.5 69.9% feature · violin
Cluster 24 43 NVE13257 1.01 11.2 93.6% feature · violin
Cluster 24 44 NVE26198 2.49 11.0 42.5% feature · violin
Cluster 24 45 NVE12172 1.41 11.0 74.5% feature · violin
Cluster 24 46 NVE7206 2.74 10.9 39.5% feature · violin
Cluster 24 47 NVE23813 1.04 10.8 92.4% feature · violin
Cluster 24 48 NVE12848 1.47 10.8 63.4% feature · violin
Cluster 24 49 NVE10283 1.98 10.7 59.3% feature · violin
Cluster 24 50 NVE2343 1.69 10.7 60.5% feature · violin
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